The Sugar Transporter family in wheat (Triticum aestivum. L): genome-wide identification, classification, and expression profiling during stress in seedlings
The sugar transporter protein (STP) plays a crucial role in regulating plant growth and stress tolerance. We performed genome-wide identification and expression analysis of the STP gene family to investigate the STPSs’ potential roles in the growth of wheat seedlings under stress. Here, a total of 8...
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PeerJ Inc.
2021-05-01
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| Online Access: | https://peerj.com/articles/11371.pdf |
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| author | Hongzhan Liu Chaoqiong Li Lin Qiao Lizong Hu Xueqin Wang Junsheng Wang Xianle Ruan Guangyu Yang Guihong Yin Chunping Wang Zhongke Sun Keshi Ma Lili Li |
| author_facet | Hongzhan Liu Chaoqiong Li Lin Qiao Lizong Hu Xueqin Wang Junsheng Wang Xianle Ruan Guangyu Yang Guihong Yin Chunping Wang Zhongke Sun Keshi Ma Lili Li |
| author_sort | Hongzhan Liu |
| collection | DOAJ |
| description | The sugar transporter protein (STP) plays a crucial role in regulating plant growth and stress tolerance. We performed genome-wide identification and expression analysis of the STP gene family to investigate the STPSs’ potential roles in the growth of wheat seedlings under stress. Here, a total of 81 TaSTP genes containing the Sugar_tr conserved motif were identified within the wheat genome. Bioinformatic studies including phylogenetic tree, chromosome position, and tandem repeat were performed to analyze the identified genes. The 81 TaSTP genes can be classified into five main groups according to their structural and phylogenetic features, with several subgroups, which were located separately on chromosomes A, B, and D. Moreover, six gene clusters were formed with more than three genes each. The results of three comparative syntenic maps of wheat associated with three representative species suggested that STP genes have strong relationships in monocots. qRT-PCR analysis confirmed that most TaSTP genes displayed different expression profiles after seedlings were subjected to six days of different stress (10% PEG6000, 150 mM NaCl, and their combination, respectively), suggesting that these genes may be involved in regulating plant growth and stress tolerance. In conclusion, 81 TaSTP genes were identified and their expressions changed under stress, indicating TaSTP’s potential roles in wheat growth monosaccharide distribution is regulated. |
| first_indexed | 2024-03-09T06:37:08Z |
| format | Article |
| id | doaj.art-5387652c3ae24722b1d98dc34be36a51 |
| institution | Directory Open Access Journal |
| issn | 2167-8359 |
| language | English |
| last_indexed | 2024-03-09T06:37:08Z |
| publishDate | 2021-05-01 |
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| spelling | doaj.art-5387652c3ae24722b1d98dc34be36a512023-12-03T10:56:15ZengPeerJ Inc.PeerJ2167-83592021-05-019e1137110.7717/peerj.11371The Sugar Transporter family in wheat (Triticum aestivum. L): genome-wide identification, classification, and expression profiling during stress in seedlingsHongzhan Liu0Chaoqiong Li1Lin Qiao2Lizong Hu3Xueqin Wang4Junsheng Wang5Xianle Ruan6Guangyu Yang7Guihong Yin8Chunping Wang9Zhongke Sun10Keshi Ma11Lili Li12Zhoukou Academy of Agricultural Sciences, Zhoukou, Henan, ChinaCollege of Life Science and Agronomy, Zhoukou Normal University, Zhoukou, Henan, ChinaCollege of Life Science and Agronomy, Zhoukou Normal University, Zhoukou, Henan, ChinaCollege of Life Science and Agronomy, Zhoukou Normal University, Zhoukou, Henan, ChinaCollege of Life Science and Agronomy, Zhoukou Normal University, Zhoukou, Henan, ChinaCollege of Life Science and Agronomy, Zhoukou Normal University, Zhoukou, Henan, ChinaCollege of Life Science and Agronomy, Zhoukou Normal University, Zhoukou, Henan, ChinaZhoukou Academy of Agricultural Sciences, Zhoukou, Henan, ChinaCollege of Agronomy, Henan Agricultural University, Zhengzhou, Henan, ChinaCollege of Agronomy, Henan University of Science and Technology, Luoyang, Henan, ChinaCollege of Life Science and Agronomy, Zhoukou Normal University, Zhoukou, Henan, ChinaCollege of Life Science and Agronomy, Zhoukou Normal University, Zhoukou, Henan, ChinaCollege of Life Science and Agronomy, Zhoukou Normal University, Zhoukou, Henan, ChinaThe sugar transporter protein (STP) plays a crucial role in regulating plant growth and stress tolerance. We performed genome-wide identification and expression analysis of the STP gene family to investigate the STPSs’ potential roles in the growth of wheat seedlings under stress. Here, a total of 81 TaSTP genes containing the Sugar_tr conserved motif were identified within the wheat genome. Bioinformatic studies including phylogenetic tree, chromosome position, and tandem repeat were performed to analyze the identified genes. The 81 TaSTP genes can be classified into five main groups according to their structural and phylogenetic features, with several subgroups, which were located separately on chromosomes A, B, and D. Moreover, six gene clusters were formed with more than three genes each. The results of three comparative syntenic maps of wheat associated with three representative species suggested that STP genes have strong relationships in monocots. qRT-PCR analysis confirmed that most TaSTP genes displayed different expression profiles after seedlings were subjected to six days of different stress (10% PEG6000, 150 mM NaCl, and their combination, respectively), suggesting that these genes may be involved in regulating plant growth and stress tolerance. In conclusion, 81 TaSTP genes were identified and their expressions changed under stress, indicating TaSTP’s potential roles in wheat growth monosaccharide distribution is regulated.https://peerj.com/articles/11371.pdfWheatGene familySugar transporterSyntenic mapsqRT-PCR |
| spellingShingle | Hongzhan Liu Chaoqiong Li Lin Qiao Lizong Hu Xueqin Wang Junsheng Wang Xianle Ruan Guangyu Yang Guihong Yin Chunping Wang Zhongke Sun Keshi Ma Lili Li The Sugar Transporter family in wheat (Triticum aestivum. L): genome-wide identification, classification, and expression profiling during stress in seedlings PeerJ Wheat Gene family Sugar transporter Syntenic maps qRT-PCR |
| title | The Sugar Transporter family in wheat (Triticum aestivum. L): genome-wide identification, classification, and expression profiling during stress in seedlings |
| title_full | The Sugar Transporter family in wheat (Triticum aestivum. L): genome-wide identification, classification, and expression profiling during stress in seedlings |
| title_fullStr | The Sugar Transporter family in wheat (Triticum aestivum. L): genome-wide identification, classification, and expression profiling during stress in seedlings |
| title_full_unstemmed | The Sugar Transporter family in wheat (Triticum aestivum. L): genome-wide identification, classification, and expression profiling during stress in seedlings |
| title_short | The Sugar Transporter family in wheat (Triticum aestivum. L): genome-wide identification, classification, and expression profiling during stress in seedlings |
| title_sort | sugar transporter family in wheat triticum aestivum l genome wide identification classification and expression profiling during stress in seedlings |
| topic | Wheat Gene family Sugar transporter Syntenic maps qRT-PCR |
| url | https://peerj.com/articles/11371.pdf |
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