Plastome structure and phylogeny of Gnetum luofuense C.Y. Cheng (Gnetaceae, Gnetales)
This article describes the complete chloroplast genome of Gnetum luofuense. The G. luofense plastome was 114,795 bp in length, containing a large single copy region (66,103 bp) and a small single copy region (9438 bp), separated by two inverted repeat regions (19,627 bp). The genome lost all ndh gen...
| Main Authors: | , , , , |
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| Format: | Article |
| Language: | English |
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Taylor & Francis Group
2020-07-01
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| Series: | Mitochondrial DNA. Part B. Resources |
| Subjects: | |
| Online Access: | http://dx.doi.org/10.1080/23802359.2020.1821818 |
| _version_ | 1797639068559867904 |
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| author | Aimee Caye G. Chang Mary Ann C. Bautista Yan Zheng Tao Wan Tao Chen |
| author_facet | Aimee Caye G. Chang Mary Ann C. Bautista Yan Zheng Tao Wan Tao Chen |
| author_sort | Aimee Caye G. Chang |
| collection | DOAJ |
| description | This article describes the complete chloroplast genome of Gnetum luofuense. The G. luofense plastome was 114,795 bp in length, containing a large single copy region (66,103 bp) and a small single copy region (9438 bp), separated by two inverted repeat regions (19,627 bp). The genome lost all ndh genes and contained 116 genes, including 68 protein-coding genes, 40 tRNA genes, and eight rRNA genes. The GC content was 33.3%, 12 genes all contained an intron, ycf3 gene contained two introns while rps12 was a transpliced gene. Phylogenetic analysis using 61 concatenated protein-coding genes suggests that G. luofuense with the rest of other gnetophytes were sister to or nested within all conifers. |
| first_indexed | 2024-03-11T13:12:31Z |
| format | Article |
| id | doaj.art-539398c263bf4d02a94d3870b5fca12c |
| institution | Directory Open Access Journal |
| issn | 2380-2359 |
| language | English |
| last_indexed | 2024-03-11T13:12:31Z |
| publishDate | 2020-07-01 |
| publisher | Taylor & Francis Group |
| record_format | Article |
| series | Mitochondrial DNA. Part B. Resources |
| spelling | doaj.art-539398c263bf4d02a94d3870b5fca12c2023-11-03T14:00:33ZengTaylor & Francis GroupMitochondrial DNA. Part B. Resources2380-23592020-07-01533369337010.1080/23802359.2020.18218181821818Plastome structure and phylogeny of Gnetum luofuense C.Y. Cheng (Gnetaceae, Gnetales)Aimee Caye G. Chang0Mary Ann C. Bautista1Yan Zheng2Tao Wan3Tao Chen4South China Botanical Garden, Chinese Academy of SciencesSouth China Botanical Garden, Chinese Academy of SciencesShenzhen Fairy Lake Botanical Garden, Chinese Academy of SciencesShenzhen Fairy Lake Botanical Garden, Chinese Academy of SciencesShenzhen Fairy Lake Botanical Garden, Chinese Academy of SciencesThis article describes the complete chloroplast genome of Gnetum luofuense. The G. luofense plastome was 114,795 bp in length, containing a large single copy region (66,103 bp) and a small single copy region (9438 bp), separated by two inverted repeat regions (19,627 bp). The genome lost all ndh genes and contained 116 genes, including 68 protein-coding genes, 40 tRNA genes, and eight rRNA genes. The GC content was 33.3%, 12 genes all contained an intron, ycf3 gene contained two introns while rps12 was a transpliced gene. Phylogenetic analysis using 61 concatenated protein-coding genes suggests that G. luofuense with the rest of other gnetophytes were sister to or nested within all conifers.http://dx.doi.org/10.1080/23802359.2020.1821818gnetaceaegnetalesgnetum luofuensecomplete chloroplast genomeplastome |
| spellingShingle | Aimee Caye G. Chang Mary Ann C. Bautista Yan Zheng Tao Wan Tao Chen Plastome structure and phylogeny of Gnetum luofuense C.Y. Cheng (Gnetaceae, Gnetales) Mitochondrial DNA. Part B. Resources gnetaceae gnetales gnetum luofuense complete chloroplast genome plastome |
| title | Plastome structure and phylogeny of Gnetum luofuense C.Y. Cheng (Gnetaceae, Gnetales) |
| title_full | Plastome structure and phylogeny of Gnetum luofuense C.Y. Cheng (Gnetaceae, Gnetales) |
| title_fullStr | Plastome structure and phylogeny of Gnetum luofuense C.Y. Cheng (Gnetaceae, Gnetales) |
| title_full_unstemmed | Plastome structure and phylogeny of Gnetum luofuense C.Y. Cheng (Gnetaceae, Gnetales) |
| title_short | Plastome structure and phylogeny of Gnetum luofuense C.Y. Cheng (Gnetaceae, Gnetales) |
| title_sort | plastome structure and phylogeny of gnetum luofuense c y cheng gnetaceae gnetales |
| topic | gnetaceae gnetales gnetum luofuense complete chloroplast genome plastome |
| url | http://dx.doi.org/10.1080/23802359.2020.1821818 |
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