Proteo-Molecular Investigation of Cultivated Rice, Wild Rice, and Barley Provides Clues of Defense Responses against <i>Rhizoctonia solani</i> Infection

<i>Rhizoctonia solani</i> is a soil-borne fungus causing sheath blight disease in cereal crops including rice. Genetic resistance to sheath blight disease in cereal crops is not well understood in most of the host(s). Aside from this, a comparative study on the different hosts at the bio...

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Bibliographic Details
Main Authors: Md. Shamim, Divakar Sharma, Deepa Bisht, Rashmi Maurya, Mayank Kaashyap, Deepti Srivastava, Anurag Mishra, Deepak Kumar, Mahesh Kumar, Vijaya Naresh Juturu, N. A. Khan, Sameer Chaudhary, Raja Hussain, K. N. Singh
Format: Article
Language:English
Published: MDPI AG 2022-10-01
Series:Bioengineering
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Online Access:https://www.mdpi.com/2306-5354/9/10/589
Description
Summary:<i>Rhizoctonia solani</i> is a soil-borne fungus causing sheath blight disease in cereal crops including rice. Genetic resistance to sheath blight disease in cereal crops is not well understood in most of the host(s). Aside from this, a comparative study on the different hosts at the biochemical and proteomic level upon <i>R. solani</i> infection was not reported earlier. Here, we performed proteomic based analysis and studied defense pathways among cultivated rice (cv. Pusa Basmati-1), wild rice accession (<i>Oryza grandiglumis</i>), and barley (cv. NDB-1445) after inoculation with <i>R. solani</i>. Increased levels of phenol, peroxidase, and β-1, 3-glucanase were observed in infected tissue as compared to the control in all of the hosts. Wild rice accession <i>O. grandiglumis</i> showed a higher level of biochemical signals than barley cv. NDB 1445 and cultivated rice cv. Pusa Basmati-1. Using two-dimensional polyacrylamide gel electrophoresis (2D-PAGE) and mass spectrometry (MS), differently expressed proteins were also studied in control and after inoculation with <i>R. solani</i>. Wild rice accession <i>O. grandiglumis</i> induced a cysteine protease inhibitor and zinc finger proteins, which have defense functions and resistance against fungal pathogens. On the other hand, barley cv. NDB-1445 and cultivated rice cv. Pusa Basmati-1 mainly induce energy metabolism-related proteins/signals after inoculation with <i>R. solani</i> in comparison to wild rice accession <i>O. grandiglumis</i>. The present comprehensive study of <i>R. solani</i> interaction using three hosts, namely, Pusa Basmati-1 (cultivated rice), <i>O. grandiglumis</i> (wild rice), and NDB-1445 (barley) would interpret wider possibilities in the dissection of the protein(s) induced during the infection process. These proteins may further be correlated to the gene(s) and other related molecular tools that will help for the marker-assisted breeding and/or gene editing for this distressing disease among the major cereal crops.
ISSN:2306-5354