An inflamed tumor cell subpopulation promotes chemotherapy resistance in triple negative breast cancer

Abstract Individual cancers are composed of heterogeneous tumor cells with distinct phenotypes and genotypes, with triple negative breast cancers (TNBC) demonstrating the most heterogeneity among breast cancer types. Variability in transcriptional phenotypes could meaningfully limit the efficacy of...

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Main Authors: Mauricio Jacobo Jacobo, Hayley J. Donnella, Sushil Sobti, Swati Kaushik, Andrei Goga, Sourav Bandyopadhyay
Format: Article
Language:English
Published: Nature Portfolio 2024-02-01
Series:Scientific Reports
Online Access:https://doi.org/10.1038/s41598-024-53999-w
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author Mauricio Jacobo Jacobo
Hayley J. Donnella
Sushil Sobti
Swati Kaushik
Andrei Goga
Sourav Bandyopadhyay
author_facet Mauricio Jacobo Jacobo
Hayley J. Donnella
Sushil Sobti
Swati Kaushik
Andrei Goga
Sourav Bandyopadhyay
author_sort Mauricio Jacobo Jacobo
collection DOAJ
description Abstract Individual cancers are composed of heterogeneous tumor cells with distinct phenotypes and genotypes, with triple negative breast cancers (TNBC) demonstrating the most heterogeneity among breast cancer types. Variability in transcriptional phenotypes could meaningfully limit the efficacy of monotherapies and fuel drug resistance, although to an unknown extent. To determine if transcriptional differences between tumor cells lead to differential drug responses we performed single cell RNA-seq on cell line and PDX models of breast cancer revealing cell subpopulations in states associated with resistance to standard-of-care therapies. We found that TNBC models contained a subpopulation in an inflamed cellular state, often also present in human breast cancer samples. Inflamed cells display evidence of heightened cGAS/STING signaling which we demonstrate is sufficient to cause tumor cell resistance to chemotherapy. Accordingly, inflamed cells were enriched in human tumors taken after neoadjuvant chemotherapy and associated with early recurrence, highlighting the potential for diverse tumor cell states to promote drug resistance.
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spelling doaj.art-54547d28190b4392a930f8ef09f1e6a62024-03-05T19:09:29ZengNature PortfolioScientific Reports2045-23222024-02-0114111510.1038/s41598-024-53999-wAn inflamed tumor cell subpopulation promotes chemotherapy resistance in triple negative breast cancerMauricio Jacobo Jacobo0Hayley J. Donnella1Sushil Sobti2Swati Kaushik3Andrei Goga4Sourav Bandyopadhyay5Department of Bioengineering and Therapeutic Sciences, University of California San FranciscoDepartment of Bioengineering and Therapeutic Sciences, University of California San FranciscoDepartment of Bioengineering and Therapeutic Sciences, University of California San FranciscoDepartment of Bioengineering and Therapeutic Sciences, University of California San FranciscoDepartment of Cell & Tissue Biology, University of California San FranciscoDepartment of Bioengineering and Therapeutic Sciences, University of California San FranciscoAbstract Individual cancers are composed of heterogeneous tumor cells with distinct phenotypes and genotypes, with triple negative breast cancers (TNBC) demonstrating the most heterogeneity among breast cancer types. Variability in transcriptional phenotypes could meaningfully limit the efficacy of monotherapies and fuel drug resistance, although to an unknown extent. To determine if transcriptional differences between tumor cells lead to differential drug responses we performed single cell RNA-seq on cell line and PDX models of breast cancer revealing cell subpopulations in states associated with resistance to standard-of-care therapies. We found that TNBC models contained a subpopulation in an inflamed cellular state, often also present in human breast cancer samples. Inflamed cells display evidence of heightened cGAS/STING signaling which we demonstrate is sufficient to cause tumor cell resistance to chemotherapy. Accordingly, inflamed cells were enriched in human tumors taken after neoadjuvant chemotherapy and associated with early recurrence, highlighting the potential for diverse tumor cell states to promote drug resistance.https://doi.org/10.1038/s41598-024-53999-w
spellingShingle Mauricio Jacobo Jacobo
Hayley J. Donnella
Sushil Sobti
Swati Kaushik
Andrei Goga
Sourav Bandyopadhyay
An inflamed tumor cell subpopulation promotes chemotherapy resistance in triple negative breast cancer
Scientific Reports
title An inflamed tumor cell subpopulation promotes chemotherapy resistance in triple negative breast cancer
title_full An inflamed tumor cell subpopulation promotes chemotherapy resistance in triple negative breast cancer
title_fullStr An inflamed tumor cell subpopulation promotes chemotherapy resistance in triple negative breast cancer
title_full_unstemmed An inflamed tumor cell subpopulation promotes chemotherapy resistance in triple negative breast cancer
title_short An inflamed tumor cell subpopulation promotes chemotherapy resistance in triple negative breast cancer
title_sort inflamed tumor cell subpopulation promotes chemotherapy resistance in triple negative breast cancer
url https://doi.org/10.1038/s41598-024-53999-w
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