Exploring the size of reference population for expected accuracy of genomic prediction using simulated and real data in Japanese Black cattle

Exploring the size of reference population for expected accuracy of genomic prediction using simulated and real data in Japanese Black cattle

Abstract Background Size of reference population is a crucial factor affecting the accuracy of prediction of the genomic estimated breeding value (GEBV). There are few studies in beef cattle that have compared accuracies achieved using real data to that achieved with simulated data and deterministic...

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Main Authors: Masayuki Takeda, Keiichi Inoue, Hidemi Oyama, Katsuo Uchiyama, Kanako Yoshinari, Nanae Sasago, Takatoshi Kojima, Masashi Kashima, Hiromi Suzuki, Takehiro Kamata, Masahiro Kumagai, Wataru Takasugi, Tatsuya Aonuma, Yuusuke Soma, Sachi Konno, Takaaki Saito, Mana Ishida, Eiji Muraki, Yoshinobu Inoue, Megumi Takayama, Shota Nariai, Ryoya Hideshima, Ryoichi Nakamura, Sayuri Nishikawa, Hiroshi Kobayashi, Eri Shibata, Koji Yamamoto, Kenichi Yoshimura, Hironori Matsuda, Tetsuro Inoue, Atsumi Fujita, Shohei Terayama, Kazuya Inoue, Sayuri Morita, Ryotaro Nakashima, Ryohei Suezawa, Takeshi Hanamure, Atsushi Zoda, Yoshinobu Uemoto
Format: Article
Language:English
Published: BMC 2021-11-01
Series:BMC Genomics
Subjects:
Accuracy of genomic prediction
Size of reference population
Independent chromosome segments
Online Access:https://doi.org/10.1186/s12864-021-08121-z

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