Diverse secondary metabolites are expressed in particle-associated and free-living microorganisms of the permanently anoxic Cariaco Basin
Genome mining for biosynthetic gene clusters (BGCs) can be used for the discovery of new compounds of biotechnological interest. Here, the authors use metagenomics and metatranscriptomics to identify diverse BGCs in free-living and particle-associated microbial communities through the stratified wat...
Main Authors: | , , , , , |
---|---|
Format: | Article |
Language: | English |
Published: |
Nature Portfolio
2023-02-01
|
Series: | Nature Communications |
Online Access: | https://doi.org/10.1038/s41467-023-36026-w |
_version_ | 1811165839050670080 |
---|---|
author | David Geller-McGrath Paraskevi Mara Gordon T. Taylor Elizabeth Suter Virginia Edgcomb Maria Pachiadaki |
author_facet | David Geller-McGrath Paraskevi Mara Gordon T. Taylor Elizabeth Suter Virginia Edgcomb Maria Pachiadaki |
author_sort | David Geller-McGrath |
collection | DOAJ |
description | Genome mining for biosynthetic gene clusters (BGCs) can be used for the discovery of new compounds of biotechnological interest. Here, the authors use metagenomics and metatranscriptomics to identify diverse BGCs in free-living and particle-associated microbial communities through the stratified water column of the Cariaco Basin, Venezuela. |
first_indexed | 2024-04-10T15:43:09Z |
format | Article |
id | doaj.art-566c8148a6ae4d29a9bfa79dd3663b8b |
institution | Directory Open Access Journal |
issn | 2041-1723 |
language | English |
last_indexed | 2024-04-10T15:43:09Z |
publishDate | 2023-02-01 |
publisher | Nature Portfolio |
record_format | Article |
series | Nature Communications |
spelling | doaj.art-566c8148a6ae4d29a9bfa79dd3663b8b2023-02-12T12:16:47ZengNature PortfolioNature Communications2041-17232023-02-0114111210.1038/s41467-023-36026-wDiverse secondary metabolites are expressed in particle-associated and free-living microorganisms of the permanently anoxic Cariaco BasinDavid Geller-McGrath0Paraskevi Mara1Gordon T. Taylor2Elizabeth Suter3Virginia Edgcomb4Maria Pachiadaki5Biology Department, Woods Hole Oceanographic InstitutionGeology & Geophysics Department, Woods Hole Oceanographic InstitutionSchool of Marine and Atmospheric Sciences, Stony Brook UniversitySchool of Marine and Atmospheric Sciences, Stony Brook UniversityGeology & Geophysics Department, Woods Hole Oceanographic InstitutionBiology Department, Woods Hole Oceanographic InstitutionGenome mining for biosynthetic gene clusters (BGCs) can be used for the discovery of new compounds of biotechnological interest. Here, the authors use metagenomics and metatranscriptomics to identify diverse BGCs in free-living and particle-associated microbial communities through the stratified water column of the Cariaco Basin, Venezuela.https://doi.org/10.1038/s41467-023-36026-w |
spellingShingle | David Geller-McGrath Paraskevi Mara Gordon T. Taylor Elizabeth Suter Virginia Edgcomb Maria Pachiadaki Diverse secondary metabolites are expressed in particle-associated and free-living microorganisms of the permanently anoxic Cariaco Basin Nature Communications |
title | Diverse secondary metabolites are expressed in particle-associated and free-living microorganisms of the permanently anoxic Cariaco Basin |
title_full | Diverse secondary metabolites are expressed in particle-associated and free-living microorganisms of the permanently anoxic Cariaco Basin |
title_fullStr | Diverse secondary metabolites are expressed in particle-associated and free-living microorganisms of the permanently anoxic Cariaco Basin |
title_full_unstemmed | Diverse secondary metabolites are expressed in particle-associated and free-living microorganisms of the permanently anoxic Cariaco Basin |
title_short | Diverse secondary metabolites are expressed in particle-associated and free-living microorganisms of the permanently anoxic Cariaco Basin |
title_sort | diverse secondary metabolites are expressed in particle associated and free living microorganisms of the permanently anoxic cariaco basin |
url | https://doi.org/10.1038/s41467-023-36026-w |
work_keys_str_mv | AT davidgellermcgrath diversesecondarymetabolitesareexpressedinparticleassociatedandfreelivingmicroorganismsofthepermanentlyanoxiccariacobasin AT paraskevimara diversesecondarymetabolitesareexpressedinparticleassociatedandfreelivingmicroorganismsofthepermanentlyanoxiccariacobasin AT gordonttaylor diversesecondarymetabolitesareexpressedinparticleassociatedandfreelivingmicroorganismsofthepermanentlyanoxiccariacobasin AT elizabethsuter diversesecondarymetabolitesareexpressedinparticleassociatedandfreelivingmicroorganismsofthepermanentlyanoxiccariacobasin AT virginiaedgcomb diversesecondarymetabolitesareexpressedinparticleassociatedandfreelivingmicroorganismsofthepermanentlyanoxiccariacobasin AT mariapachiadaki diversesecondarymetabolitesareexpressedinparticleassociatedandfreelivingmicroorganismsofthepermanentlyanoxiccariacobasin |