A Large-Scale Mouse Pose Dataset for Mouse Pose Estimation

Mouse pose estimations have important applications in the fields of animal behavior research, biomedicine, and animal conservation studies. Accurate and efficient mouse pose estimations using computer vision are necessary. Although methods for mouse pose estimations have developed, bottlenecks still...

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Main Authors: Jun Sun, Jing Wu, Xianghui Liao, Sijia Wang, Mantao Wang
Format: Article
Language:English
Published: MDPI AG 2022-04-01
Series:Symmetry
Subjects:
Online Access:https://www.mdpi.com/2073-8994/14/5/875
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author Jun Sun
Jing Wu
Xianghui Liao
Sijia Wang
Mantao Wang
author_facet Jun Sun
Jing Wu
Xianghui Liao
Sijia Wang
Mantao Wang
author_sort Jun Sun
collection DOAJ
description Mouse pose estimations have important applications in the fields of animal behavior research, biomedicine, and animal conservation studies. Accurate and efficient mouse pose estimations using computer vision are necessary. Although methods for mouse pose estimations have developed, bottlenecks still exist. One of the most prominent problems is the lack of uniform and standardized training datasets. Here, we resolve this difficulty by introducing the mouse pose dataset. Our mouse pose dataset contains 40,000 frames of RGB images and large-scale 2D ground-truth motion images. All the images were captured from interacting lab mice through a stable single viewpoint, including 5 distinct species and 20 mice in total. Moreover, to improve the annotation efficiency, five keypoints of mice are creatively proposed, in which one keypoint is at the center and the other two pairs of keypoints are symmetric. Then, we created simple, yet effective software that works for annotating images. It is another important link to establish a benchmark model for 2D mouse pose estimations. We employed modified object detections and pose estimation algorithms to achieve precise, effective, and robust performances. As the first large and standardized mouse pose dataset, our proposed mouse pose dataset will help advance research on animal pose estimations and assist in application areas related to animal experiments.
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spelling doaj.art-578161c054cb454487712bf43a5d04852023-11-23T13:17:30ZengMDPI AGSymmetry2073-89942022-04-0114587510.3390/sym14050875A Large-Scale Mouse Pose Dataset for Mouse Pose EstimationJun Sun0Jing Wu1Xianghui Liao2Sijia Wang3Mantao Wang4College of Information Engineering, Sichuan Agricultural University, Ya’an 625000, ChinaCollege of Information Engineering, Sichuan Agricultural University, Ya’an 625000, ChinaCollege of Information Engineering, Sichuan Agricultural University, Ya’an 625000, ChinaCollege of Information Engineering, Sichuan Agricultural University, Ya’an 625000, ChinaSichuan Key Laboratory of Agricultural Information Engineering, Ya’an 625000, ChinaMouse pose estimations have important applications in the fields of animal behavior research, biomedicine, and animal conservation studies. Accurate and efficient mouse pose estimations using computer vision are necessary. Although methods for mouse pose estimations have developed, bottlenecks still exist. One of the most prominent problems is the lack of uniform and standardized training datasets. Here, we resolve this difficulty by introducing the mouse pose dataset. Our mouse pose dataset contains 40,000 frames of RGB images and large-scale 2D ground-truth motion images. All the images were captured from interacting lab mice through a stable single viewpoint, including 5 distinct species and 20 mice in total. Moreover, to improve the annotation efficiency, five keypoints of mice are creatively proposed, in which one keypoint is at the center and the other two pairs of keypoints are symmetric. Then, we created simple, yet effective software that works for annotating images. It is another important link to establish a benchmark model for 2D mouse pose estimations. We employed modified object detections and pose estimation algorithms to achieve precise, effective, and robust performances. As the first large and standardized mouse pose dataset, our proposed mouse pose dataset will help advance research on animal pose estimations and assist in application areas related to animal experiments.https://www.mdpi.com/2073-8994/14/5/875mouse pose estimationdatasetdeep learningcomputer vision
spellingShingle Jun Sun
Jing Wu
Xianghui Liao
Sijia Wang
Mantao Wang
A Large-Scale Mouse Pose Dataset for Mouse Pose Estimation
Symmetry
mouse pose estimation
dataset
deep learning
computer vision
title A Large-Scale Mouse Pose Dataset for Mouse Pose Estimation
title_full A Large-Scale Mouse Pose Dataset for Mouse Pose Estimation
title_fullStr A Large-Scale Mouse Pose Dataset for Mouse Pose Estimation
title_full_unstemmed A Large-Scale Mouse Pose Dataset for Mouse Pose Estimation
title_short A Large-Scale Mouse Pose Dataset for Mouse Pose Estimation
title_sort large scale mouse pose dataset for mouse pose estimation
topic mouse pose estimation
dataset
deep learning
computer vision
url https://www.mdpi.com/2073-8994/14/5/875
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