A Pseudovirus-Based Neutralization Assay for SARS-CoV-2 Variants: A Rapid, Cost-Effective, BSL-2–Based High-Throughput Assay Useful for Vaccine Immunogenicity Evaluation

Neutralizing antibody responses from COVID-19 vaccines are pivotal in conferring protection against severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2). Effective COVID-19 vaccines and assays measuring neutralizing antibodies against emerging variants (i.e., XBB.1.5, XBB.1.16, and XBB.2.3)...

Full description

Bibliographic Details
Main Authors: Zhaohui Cai, Raj Kalkeri, Mingzhu Zhu, Shane Cloney-Clark, Benjamin Haner, Mi Wang, Bahar Osman, Dominic Dent, Sheau-Line Feng, Zach Longacre, Greg Glenn, Joyce S. Plested
Format: Article
Language:English
Published: MDPI AG 2024-02-01
Series:Microorganisms
Subjects:
Online Access:https://www.mdpi.com/2076-2607/12/3/501
_version_ 1797239995620130816
author Zhaohui Cai
Raj Kalkeri
Mingzhu Zhu
Shane Cloney-Clark
Benjamin Haner
Mi Wang
Bahar Osman
Dominic Dent
Sheau-Line Feng
Zach Longacre
Greg Glenn
Joyce S. Plested
author_facet Zhaohui Cai
Raj Kalkeri
Mingzhu Zhu
Shane Cloney-Clark
Benjamin Haner
Mi Wang
Bahar Osman
Dominic Dent
Sheau-Line Feng
Zach Longacre
Greg Glenn
Joyce S. Plested
author_sort Zhaohui Cai
collection DOAJ
description Neutralizing antibody responses from COVID-19 vaccines are pivotal in conferring protection against severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2). Effective COVID-19 vaccines and assays measuring neutralizing antibodies against emerging variants (i.e., XBB.1.5, XBB.1.16, and XBB.2.3) are needed. The use of biosafety level (BSL)-3 laboratories for live virus assays results in higher costs and a longer turnaround time; therefore, a BSL-2–based pseudovirus neutralization assay (PNT) was developed. The pseudoviruses were produced by cotransfecting cells with plasmids encoding a lentiviral backbone-expressing luciferase reporter; non-surface proteins for lentiviral production; and ancestral or Omicron (BA.1 and BA.5) SARS-CoV-2 spike (S) proteins. The PNT was developed and optimized in dose and kinetics experiments. The representative serum samples (COVID-19–convalescent or NVX-CoV2373–vaccinated participants enrolled in the 2019nCoV-101 trial) demonstrated a wide dynamic range. The neutralization data showed robust correlation with validated anti-recombinant spike IgG levels and angiotensin-converting enzyme 2 inhibition titers (ancestral). This assay is suitable for measurement of the neutralization ability in clinical samples from individuals infected with SARS-CoV-2 or immunized with a COVID-19 vaccine. The results suggest that this PNT provides a lower cost, high-throughput, rapid turnaround alternative to BSL-3–based microneutralization assays and enables the discovery and development of effective vaccines against emerging variants.
first_indexed 2024-04-24T18:00:24Z
format Article
id doaj.art-5858950851b847d3a887997ce88e0ecc
institution Directory Open Access Journal
issn 2076-2607
language English
last_indexed 2024-04-24T18:00:24Z
publishDate 2024-02-01
publisher MDPI AG
record_format Article
series Microorganisms
spelling doaj.art-5858950851b847d3a887997ce88e0ecc2024-03-27T13:55:39ZengMDPI AGMicroorganisms2076-26072024-02-0112350110.3390/microorganisms12030501A Pseudovirus-Based Neutralization Assay for SARS-CoV-2 Variants: A Rapid, Cost-Effective, BSL-2–Based High-Throughput Assay Useful for Vaccine Immunogenicity EvaluationZhaohui Cai0Raj Kalkeri1Mingzhu Zhu2Shane Cloney-Clark3Benjamin Haner4Mi Wang5Bahar Osman6Dominic Dent7Sheau-Line Feng8Zach Longacre9Greg Glenn10Joyce S. Plested11Clinical Immunology, Novavax, Gaithersburg, MD 20878, USAClinical Immunology, Novavax, Gaithersburg, MD 20878, USAClinical Immunology, Novavax, Gaithersburg, MD 20878, USAClinical Immunology, Novavax, Gaithersburg, MD 20878, USAClinical Immunology, Novavax, Gaithersburg, MD 20878, USAClinical Immunology, Novavax, Gaithersburg, MD 20878, USAClinical Immunology, Novavax, Gaithersburg, MD 20878, USAClinical Immunology, Novavax, Gaithersburg, MD 20878, USAClinical Immunology, Novavax, Gaithersburg, MD 20878, USADiscovery, Novavax, Gaithersburg, MD 20878, USADiscovery, Novavax, Gaithersburg, MD 20878, USAClinical Immunology, Novavax, Gaithersburg, MD 20878, USANeutralizing antibody responses from COVID-19 vaccines are pivotal in conferring protection against severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2). Effective COVID-19 vaccines and assays measuring neutralizing antibodies against emerging variants (i.e., XBB.1.5, XBB.1.16, and XBB.2.3) are needed. The use of biosafety level (BSL)-3 laboratories for live virus assays results in higher costs and a longer turnaround time; therefore, a BSL-2–based pseudovirus neutralization assay (PNT) was developed. The pseudoviruses were produced by cotransfecting cells with plasmids encoding a lentiviral backbone-expressing luciferase reporter; non-surface proteins for lentiviral production; and ancestral or Omicron (BA.1 and BA.5) SARS-CoV-2 spike (S) proteins. The PNT was developed and optimized in dose and kinetics experiments. The representative serum samples (COVID-19–convalescent or NVX-CoV2373–vaccinated participants enrolled in the 2019nCoV-101 trial) demonstrated a wide dynamic range. The neutralization data showed robust correlation with validated anti-recombinant spike IgG levels and angiotensin-converting enzyme 2 inhibition titers (ancestral). This assay is suitable for measurement of the neutralization ability in clinical samples from individuals infected with SARS-CoV-2 or immunized with a COVID-19 vaccine. The results suggest that this PNT provides a lower cost, high-throughput, rapid turnaround alternative to BSL-3–based microneutralization assays and enables the discovery and development of effective vaccines against emerging variants.https://www.mdpi.com/2076-2607/12/3/501COVID-19pseudovirus-based neutralization assaysimmunogenicitySARS-CoV-2assay validationneutralizing antibody titers
spellingShingle Zhaohui Cai
Raj Kalkeri
Mingzhu Zhu
Shane Cloney-Clark
Benjamin Haner
Mi Wang
Bahar Osman
Dominic Dent
Sheau-Line Feng
Zach Longacre
Greg Glenn
Joyce S. Plested
A Pseudovirus-Based Neutralization Assay for SARS-CoV-2 Variants: A Rapid, Cost-Effective, BSL-2–Based High-Throughput Assay Useful for Vaccine Immunogenicity Evaluation
Microorganisms
COVID-19
pseudovirus-based neutralization assays
immunogenicity
SARS-CoV-2
assay validation
neutralizing antibody titers
title A Pseudovirus-Based Neutralization Assay for SARS-CoV-2 Variants: A Rapid, Cost-Effective, BSL-2–Based High-Throughput Assay Useful for Vaccine Immunogenicity Evaluation
title_full A Pseudovirus-Based Neutralization Assay for SARS-CoV-2 Variants: A Rapid, Cost-Effective, BSL-2–Based High-Throughput Assay Useful for Vaccine Immunogenicity Evaluation
title_fullStr A Pseudovirus-Based Neutralization Assay for SARS-CoV-2 Variants: A Rapid, Cost-Effective, BSL-2–Based High-Throughput Assay Useful for Vaccine Immunogenicity Evaluation
title_full_unstemmed A Pseudovirus-Based Neutralization Assay for SARS-CoV-2 Variants: A Rapid, Cost-Effective, BSL-2–Based High-Throughput Assay Useful for Vaccine Immunogenicity Evaluation
title_short A Pseudovirus-Based Neutralization Assay for SARS-CoV-2 Variants: A Rapid, Cost-Effective, BSL-2–Based High-Throughput Assay Useful for Vaccine Immunogenicity Evaluation
title_sort pseudovirus based neutralization assay for sars cov 2 variants a rapid cost effective bsl 2 based high throughput assay useful for vaccine immunogenicity evaluation
topic COVID-19
pseudovirus-based neutralization assays
immunogenicity
SARS-CoV-2
assay validation
neutralizing antibody titers
url https://www.mdpi.com/2076-2607/12/3/501
work_keys_str_mv AT zhaohuicai apseudovirusbasedneutralizationassayforsarscov2variantsarapidcosteffectivebsl2basedhighthroughputassayusefulforvaccineimmunogenicityevaluation
AT rajkalkeri apseudovirusbasedneutralizationassayforsarscov2variantsarapidcosteffectivebsl2basedhighthroughputassayusefulforvaccineimmunogenicityevaluation
AT mingzhuzhu apseudovirusbasedneutralizationassayforsarscov2variantsarapidcosteffectivebsl2basedhighthroughputassayusefulforvaccineimmunogenicityevaluation
AT shanecloneyclark apseudovirusbasedneutralizationassayforsarscov2variantsarapidcosteffectivebsl2basedhighthroughputassayusefulforvaccineimmunogenicityevaluation
AT benjaminhaner apseudovirusbasedneutralizationassayforsarscov2variantsarapidcosteffectivebsl2basedhighthroughputassayusefulforvaccineimmunogenicityevaluation
AT miwang apseudovirusbasedneutralizationassayforsarscov2variantsarapidcosteffectivebsl2basedhighthroughputassayusefulforvaccineimmunogenicityevaluation
AT baharosman apseudovirusbasedneutralizationassayforsarscov2variantsarapidcosteffectivebsl2basedhighthroughputassayusefulforvaccineimmunogenicityevaluation
AT dominicdent apseudovirusbasedneutralizationassayforsarscov2variantsarapidcosteffectivebsl2basedhighthroughputassayusefulforvaccineimmunogenicityevaluation
AT sheaulinefeng apseudovirusbasedneutralizationassayforsarscov2variantsarapidcosteffectivebsl2basedhighthroughputassayusefulforvaccineimmunogenicityevaluation
AT zachlongacre apseudovirusbasedneutralizationassayforsarscov2variantsarapidcosteffectivebsl2basedhighthroughputassayusefulforvaccineimmunogenicityevaluation
AT gregglenn apseudovirusbasedneutralizationassayforsarscov2variantsarapidcosteffectivebsl2basedhighthroughputassayusefulforvaccineimmunogenicityevaluation
AT joycesplested apseudovirusbasedneutralizationassayforsarscov2variantsarapidcosteffectivebsl2basedhighthroughputassayusefulforvaccineimmunogenicityevaluation
AT zhaohuicai pseudovirusbasedneutralizationassayforsarscov2variantsarapidcosteffectivebsl2basedhighthroughputassayusefulforvaccineimmunogenicityevaluation
AT rajkalkeri pseudovirusbasedneutralizationassayforsarscov2variantsarapidcosteffectivebsl2basedhighthroughputassayusefulforvaccineimmunogenicityevaluation
AT mingzhuzhu pseudovirusbasedneutralizationassayforsarscov2variantsarapidcosteffectivebsl2basedhighthroughputassayusefulforvaccineimmunogenicityevaluation
AT shanecloneyclark pseudovirusbasedneutralizationassayforsarscov2variantsarapidcosteffectivebsl2basedhighthroughputassayusefulforvaccineimmunogenicityevaluation
AT benjaminhaner pseudovirusbasedneutralizationassayforsarscov2variantsarapidcosteffectivebsl2basedhighthroughputassayusefulforvaccineimmunogenicityevaluation
AT miwang pseudovirusbasedneutralizationassayforsarscov2variantsarapidcosteffectivebsl2basedhighthroughputassayusefulforvaccineimmunogenicityevaluation
AT baharosman pseudovirusbasedneutralizationassayforsarscov2variantsarapidcosteffectivebsl2basedhighthroughputassayusefulforvaccineimmunogenicityevaluation
AT dominicdent pseudovirusbasedneutralizationassayforsarscov2variantsarapidcosteffectivebsl2basedhighthroughputassayusefulforvaccineimmunogenicityevaluation
AT sheaulinefeng pseudovirusbasedneutralizationassayforsarscov2variantsarapidcosteffectivebsl2basedhighthroughputassayusefulforvaccineimmunogenicityevaluation
AT zachlongacre pseudovirusbasedneutralizationassayforsarscov2variantsarapidcosteffectivebsl2basedhighthroughputassayusefulforvaccineimmunogenicityevaluation
AT gregglenn pseudovirusbasedneutralizationassayforsarscov2variantsarapidcosteffectivebsl2basedhighthroughputassayusefulforvaccineimmunogenicityevaluation
AT joycesplested pseudovirusbasedneutralizationassayforsarscov2variantsarapidcosteffectivebsl2basedhighthroughputassayusefulforvaccineimmunogenicityevaluation