Next-generation sequencing yields the complete mitogenome of Caridina multidentata and phylogenetic analysis
In this study, the complete mitochondrial genome (mitogenome) of Caridina multidentata is reported for the first time. These data demonstrate that the C. multidentata mitochondrial genome is a 15,825 bp circular molecule and encodes the typical 37 metazoan mitochondrial genes [13 protein-coding gene...
| Main Authors: | , , , , , , |
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| Format: | Article |
| Language: | English |
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Taylor & Francis Group
2018-01-01
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| Series: | Mitochondrial DNA. Part B. Resources |
| Subjects: | |
| Online Access: | http://dx.doi.org/10.1080/23802359.2017.1422403 |
| _version_ | 1797640752255205376 |
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| author | Zhengfei Wang Qiong Wu Huayun Guo Dan Tang Yuze Bai Ziqian Wang Yitao Tao |
| author_facet | Zhengfei Wang Qiong Wu Huayun Guo Dan Tang Yuze Bai Ziqian Wang Yitao Tao |
| author_sort | Zhengfei Wang |
| collection | DOAJ |
| description | In this study, the complete mitochondrial genome (mitogenome) of Caridina multidentata is reported for the first time. These data demonstrate that the C. multidentata mitochondrial genome is a 15,825 bp circular molecule and encodes the typical 37 metazoan mitochondrial genes [13 protein-coding genes (PCGs), 22 transfer RNA genes (tRNAs), two ribosomal RNA genes (rRNAs)] and an A + T-rich control region. The genome composition was highly A + T biased 63.45% and showed negative AT-skew (−0.131) and slightly possitive GC-skew (0.018). The complete mitogenome provides essential and important DNA molecular data for further phylogenetic and evolutionary analysis for shrimps. |
| first_indexed | 2024-03-11T13:36:19Z |
| format | Article |
| id | doaj.art-5a319b5311f8419d9b31f4d57d908071 |
| institution | Directory Open Access Journal |
| issn | 2380-2359 |
| language | English |
| last_indexed | 2024-03-11T13:36:19Z |
| publishDate | 2018-01-01 |
| publisher | Taylor & Francis Group |
| record_format | Article |
| series | Mitochondrial DNA. Part B. Resources |
| spelling | doaj.art-5a319b5311f8419d9b31f4d57d9080712023-11-02T15:42:59ZengTaylor & Francis GroupMitochondrial DNA. Part B. Resources2380-23592018-01-0131687010.1080/23802359.2017.14224031422403Next-generation sequencing yields the complete mitogenome of Caridina multidentata and phylogenetic analysisZhengfei Wang0Qiong Wu1Huayun Guo2Dan Tang3Yuze Bai4Ziqian Wang5Yitao Tao6Yancheng Teachers UniversityYancheng Teachers UniversityYancheng Teachers UniversityYancheng Teachers UniversityYancheng Teachers UniversityYancheng Teachers UniversityYancheng Teachers UniversityIn this study, the complete mitochondrial genome (mitogenome) of Caridina multidentata is reported for the first time. These data demonstrate that the C. multidentata mitochondrial genome is a 15,825 bp circular molecule and encodes the typical 37 metazoan mitochondrial genes [13 protein-coding genes (PCGs), 22 transfer RNA genes (tRNAs), two ribosomal RNA genes (rRNAs)] and an A + T-rich control region. The genome composition was highly A + T biased 63.45% and showed negative AT-skew (−0.131) and slightly possitive GC-skew (0.018). The complete mitogenome provides essential and important DNA molecular data for further phylogenetic and evolutionary analysis for shrimps.http://dx.doi.org/10.1080/23802359.2017.1422403mitogenomephylogenticcarideaatyidaecaridina multidentata |
| spellingShingle | Zhengfei Wang Qiong Wu Huayun Guo Dan Tang Yuze Bai Ziqian Wang Yitao Tao Next-generation sequencing yields the complete mitogenome of Caridina multidentata and phylogenetic analysis Mitochondrial DNA. Part B. Resources mitogenome phylogentic caridea atyidae caridina multidentata |
| title | Next-generation sequencing yields the complete mitogenome of Caridina multidentata and phylogenetic analysis |
| title_full | Next-generation sequencing yields the complete mitogenome of Caridina multidentata and phylogenetic analysis |
| title_fullStr | Next-generation sequencing yields the complete mitogenome of Caridina multidentata and phylogenetic analysis |
| title_full_unstemmed | Next-generation sequencing yields the complete mitogenome of Caridina multidentata and phylogenetic analysis |
| title_short | Next-generation sequencing yields the complete mitogenome of Caridina multidentata and phylogenetic analysis |
| title_sort | next generation sequencing yields the complete mitogenome of caridina multidentata and phylogenetic analysis |
| topic | mitogenome phylogentic caridea atyidae caridina multidentata |
| url | http://dx.doi.org/10.1080/23802359.2017.1422403 |
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