Complete mitochondrial genome and phylogenetic analysis of black-fin stream jewel goby Stiphodon percnopterygionus (Gobiiformes: Gobiidae) from Taiwan
The complete mitochondrial genome of the black-fin stream jewel goby Stiphodon percnopterygionus has been amplified and sequenced. The whole mitochondrial genome is 16,502 base pairs (bp) in total length and consisting of 13 protein-coding genes, 2 ribosomal RNA genes, 22 transfer RNA genes, and 1 c...
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| Format: | Article |
| Language: | English |
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Taylor & Francis Group
2022-11-01
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| Series: | Mitochondrial DNA. Part B. Resources |
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| Online Access: | http://dx.doi.org/10.1080/23802359.2022.2142070 |
| _version_ | 1797638501045370880 |
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| author | Tonisman Harefa I-Shiung Chen |
| author_facet | Tonisman Harefa I-Shiung Chen |
| author_sort | Tonisman Harefa |
| collection | DOAJ |
| description | The complete mitochondrial genome of the black-fin stream jewel goby Stiphodon percnopterygionus has been amplified and sequenced. The whole mitochondrial genome is 16,502 base pairs (bp) in total length and consisting of 13 protein-coding genes, 2 ribosomal RNA genes, 22 transfer RNA genes, and 1 control region (CR). The overall base composition is 28.1% for A, 17.1% for G, 28.7% for C and 26.0% for T with AT comprising 54.1%. A phylogenetic tree was constructed using mitochondrial protein-coding genes (PCGs) sequence data for 34 related taxa of the order Gobiiformes showed that S. percnopterygionus is closely related to S. tuivi. These findings will contribute for phylogenetic, phylogeography and further genetic studies in genus Stiphodon and related gobiid fishes. |
| first_indexed | 2024-03-11T13:04:29Z |
| format | Article |
| id | doaj.art-5a3cc1e1bd9243be9b001fb4a4dbd186 |
| institution | Directory Open Access Journal |
| issn | 2380-2359 |
| language | English |
| last_indexed | 2024-03-11T13:04:29Z |
| publishDate | 2022-11-01 |
| publisher | Taylor & Francis Group |
| record_format | Article |
| series | Mitochondrial DNA. Part B. Resources |
| spelling | doaj.art-5a3cc1e1bd9243be9b001fb4a4dbd1862023-11-03T14:44:05ZengTaylor & Francis GroupMitochondrial DNA. Part B. Resources2380-23592022-11-017111968197010.1080/23802359.2022.21420702142070Complete mitochondrial genome and phylogenetic analysis of black-fin stream jewel goby Stiphodon percnopterygionus (Gobiiformes: Gobiidae) from TaiwanTonisman Harefa0I-Shiung Chen1Institute of Marine Biology, National Taiwan Ocean UniversityInstitute of Marine Biology, National Taiwan Ocean UniversityThe complete mitochondrial genome of the black-fin stream jewel goby Stiphodon percnopterygionus has been amplified and sequenced. The whole mitochondrial genome is 16,502 base pairs (bp) in total length and consisting of 13 protein-coding genes, 2 ribosomal RNA genes, 22 transfer RNA genes, and 1 control region (CR). The overall base composition is 28.1% for A, 17.1% for G, 28.7% for C and 26.0% for T with AT comprising 54.1%. A phylogenetic tree was constructed using mitochondrial protein-coding genes (PCGs) sequence data for 34 related taxa of the order Gobiiformes showed that S. percnopterygionus is closely related to S. tuivi. These findings will contribute for phylogenetic, phylogeography and further genetic studies in genus Stiphodon and related gobiid fishes.http://dx.doi.org/10.1080/23802359.2022.2142070mitogenomegobiidaephylogenetic analysisstiphodon percnopterygionus |
| spellingShingle | Tonisman Harefa I-Shiung Chen Complete mitochondrial genome and phylogenetic analysis of black-fin stream jewel goby Stiphodon percnopterygionus (Gobiiformes: Gobiidae) from Taiwan Mitochondrial DNA. Part B. Resources mitogenome gobiidae phylogenetic analysis stiphodon percnopterygionus |
| title | Complete mitochondrial genome and phylogenetic analysis of black-fin stream jewel goby Stiphodon percnopterygionus (Gobiiformes: Gobiidae) from Taiwan |
| title_full | Complete mitochondrial genome and phylogenetic analysis of black-fin stream jewel goby Stiphodon percnopterygionus (Gobiiformes: Gobiidae) from Taiwan |
| title_fullStr | Complete mitochondrial genome and phylogenetic analysis of black-fin stream jewel goby Stiphodon percnopterygionus (Gobiiformes: Gobiidae) from Taiwan |
| title_full_unstemmed | Complete mitochondrial genome and phylogenetic analysis of black-fin stream jewel goby Stiphodon percnopterygionus (Gobiiformes: Gobiidae) from Taiwan |
| title_short | Complete mitochondrial genome and phylogenetic analysis of black-fin stream jewel goby Stiphodon percnopterygionus (Gobiiformes: Gobiidae) from Taiwan |
| title_sort | complete mitochondrial genome and phylogenetic analysis of black fin stream jewel goby stiphodon percnopterygionus gobiiformes gobiidae from taiwan |
| topic | mitogenome gobiidae phylogenetic analysis stiphodon percnopterygionus |
| url | http://dx.doi.org/10.1080/23802359.2022.2142070 |
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