The Complete chloroplast genome sequence of the Nymphaea lotus L. (Nymphaeaceae)
Nymphaea lotus L. (Nymphaeaceae) is a type species of subgenus Lotos, which has been frequently cultivated in ornamental garden pools. Here, we presented complete chloroplast genome of N. lotus which is 159,311 bp long and has four subregions: 89,610 bp of large single copy (LSC) and 19,333 bp of sm...
| Main Authors: | , , , , |
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| Format: | Article |
| Language: | English |
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Taylor & Francis Group
2019-01-01
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| Series: | Mitochondrial DNA. Part B. Resources |
| Subjects: | |
| Online Access: | http://dx.doi.org/10.1080/23802359.2018.1547154 |
| _version_ | 1797640535368794112 |
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| author | Yongsung Kim Woochan Kwon Myeoung Joon Song Suhwan Nam Jongsun Park |
| author_facet | Yongsung Kim Woochan Kwon Myeoung Joon Song Suhwan Nam Jongsun Park |
| author_sort | Yongsung Kim |
| collection | DOAJ |
| description | Nymphaea lotus L. (Nymphaeaceae) is a type species of subgenus Lotos, which has been frequently cultivated in ornamental garden pools. Here, we presented complete chloroplast genome of N. lotus which is 159,311 bp long and has four subregions: 89,610 bp of large single copy (LSC) and 19,333 bp of small single copy (SSC) regions are separated by 25,184 bp of inverted repeat (IR) regions including 130 genes (85 coding genes, eight rRNAs, and 37 tRNAs). The overall GC contents of the chloroplast genome were 39.1% and in the LSC, SSC, and IR regions were 37.7%, 34.2%, and 43.4%, respectively. Phylogenetic tree constructed with whole chloroplast genomes present phylogenetic position of subgenus Lotos. |
| first_indexed | 2024-03-11T13:33:29Z |
| format | Article |
| id | doaj.art-5bf09007f7ed4b67aae93d1e38d491fe |
| institution | Directory Open Access Journal |
| issn | 2380-2359 |
| language | English |
| last_indexed | 2024-03-11T13:33:29Z |
| publishDate | 2019-01-01 |
| publisher | Taylor & Francis Group |
| record_format | Article |
| series | Mitochondrial DNA. Part B. Resources |
| spelling | doaj.art-5bf09007f7ed4b67aae93d1e38d491fe2023-11-02T16:07:24ZengTaylor & Francis GroupMitochondrial DNA. Part B. Resources2380-23592019-01-014138939010.1080/23802359.2018.15471541547154The Complete chloroplast genome sequence of the Nymphaea lotus L. (Nymphaeaceae)Yongsung Kim0Woochan Kwon1Myeoung Joon Song2Suhwan Nam3Jongsun Park4InfoBoss Co., Ltd.InfoBoss Co., Ltd.Nymph, Research Association of Aquatic PlantsBaekdudaegan National ArboretumInfoBoss Co., Ltd.Nymphaea lotus L. (Nymphaeaceae) is a type species of subgenus Lotos, which has been frequently cultivated in ornamental garden pools. Here, we presented complete chloroplast genome of N. lotus which is 159,311 bp long and has four subregions: 89,610 bp of large single copy (LSC) and 19,333 bp of small single copy (SSC) regions are separated by 25,184 bp of inverted repeat (IR) regions including 130 genes (85 coding genes, eight rRNAs, and 37 tRNAs). The overall GC contents of the chloroplast genome were 39.1% and in the LSC, SSC, and IR regions were 37.7%, 34.2%, and 43.4%, respectively. Phylogenetic tree constructed with whole chloroplast genomes present phylogenetic position of subgenus Lotos.http://dx.doi.org/10.1080/23802359.2018.1547154nymphaea lotuschloroplast genomenymphaeaceaelotosnymphaea |
| spellingShingle | Yongsung Kim Woochan Kwon Myeoung Joon Song Suhwan Nam Jongsun Park The Complete chloroplast genome sequence of the Nymphaea lotus L. (Nymphaeaceae) Mitochondrial DNA. Part B. Resources nymphaea lotus chloroplast genome nymphaeaceae lotos nymphaea |
| title | The Complete chloroplast genome sequence of the Nymphaea lotus L. (Nymphaeaceae) |
| title_full | The Complete chloroplast genome sequence of the Nymphaea lotus L. (Nymphaeaceae) |
| title_fullStr | The Complete chloroplast genome sequence of the Nymphaea lotus L. (Nymphaeaceae) |
| title_full_unstemmed | The Complete chloroplast genome sequence of the Nymphaea lotus L. (Nymphaeaceae) |
| title_short | The Complete chloroplast genome sequence of the Nymphaea lotus L. (Nymphaeaceae) |
| title_sort | complete chloroplast genome sequence of the nymphaea lotus l nymphaeaceae |
| topic | nymphaea lotus chloroplast genome nymphaeaceae lotos nymphaea |
| url | http://dx.doi.org/10.1080/23802359.2018.1547154 |
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