The mitochondrial genome analysis of Flavoperla hatakeyamae (Plecoptera: Perlidae)
In this study, we analyzed the entire mitochondrial genome of Flavoperla hatakeyamae, which has 15,730 bp in length. This complete mitochondrial genome possessed 13 protein coding genes (PCGs), 2 ribosomal RNA genes, 22 transfer RNA genes, and 1 control region. The nucleotide composition of the comp...
| Main Authors: | , , , |
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| Format: | Article |
| Language: | English |
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Taylor & Francis Group
2020-01-01
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| Series: | Mitochondrial DNA. Part B. Resources |
| Subjects: | |
| Online Access: | http://dx.doi.org/10.1080/23802359.2020.1721350 |
| _version_ | 1797639413732212736 |
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| author | Caihao Hao Guochang Wang Weihai Li Jinjun Cao |
| author_facet | Caihao Hao Guochang Wang Weihai Li Jinjun Cao |
| author_sort | Caihao Hao |
| collection | DOAJ |
| description | In this study, we analyzed the entire mitochondrial genome of Flavoperla hatakeyamae, which has 15,730 bp in length. This complete mitochondrial genome possessed 13 protein coding genes (PCGs), 2 ribosomal RNA genes, 22 transfer RNA genes, and 1 control region. The nucleotide composition of the complete sequence of mitochondrial genome was accounting for 35.0%, T for 31.3%, C for 21.2%, G for 12.5%, and A + T for 66.3%. Among the 13 protein-coding genes, the starting codon of 12 protein-coding genes was ATN except the starting codon of COII was ACC. In addition, 11 of the protein-coding genes used conservative termination codon TAA/TAG, except for COII and ND5 which terminated by a single T. Based on Bayesian (BI) and maximum-likelihood (ML) methods, we found that the genus Flavoperla and Niponiella were gathered into one branch and the species of Perlinae were clustered in one clade. |
| first_indexed | 2024-03-11T13:17:29Z |
| format | Article |
| id | doaj.art-5c61a33c714c4e75a7033bb4539403c8 |
| institution | Directory Open Access Journal |
| issn | 2380-2359 |
| language | English |
| last_indexed | 2024-03-11T13:17:29Z |
| publishDate | 2020-01-01 |
| publisher | Taylor & Francis Group |
| record_format | Article |
| series | Mitochondrial DNA. Part B. Resources |
| spelling | doaj.art-5c61a33c714c4e75a7033bb4539403c82023-11-03T11:00:22ZengTaylor & Francis GroupMitochondrial DNA. Part B. Resources2380-23592020-01-01511023102410.1080/23802359.2020.17213501721350The mitochondrial genome analysis of Flavoperla hatakeyamae (Plecoptera: Perlidae)Caihao Hao0Guochang Wang1Weihai Li2Jinjun Cao3Department of Plant Protection, Henan Institute of Science and TechnologyDepartment of Plant Protection, Henan Institute of Science and TechnologyDepartment of Plant Protection, Henan Institute of Science and TechnologyDepartment of Plant Protection, Henan Institute of Science and TechnologyIn this study, we analyzed the entire mitochondrial genome of Flavoperla hatakeyamae, which has 15,730 bp in length. This complete mitochondrial genome possessed 13 protein coding genes (PCGs), 2 ribosomal RNA genes, 22 transfer RNA genes, and 1 control region. The nucleotide composition of the complete sequence of mitochondrial genome was accounting for 35.0%, T for 31.3%, C for 21.2%, G for 12.5%, and A + T for 66.3%. Among the 13 protein-coding genes, the starting codon of 12 protein-coding genes was ATN except the starting codon of COII was ACC. In addition, 11 of the protein-coding genes used conservative termination codon TAA/TAG, except for COII and ND5 which terminated by a single T. Based on Bayesian (BI) and maximum-likelihood (ML) methods, we found that the genus Flavoperla and Niponiella were gathered into one branch and the species of Perlinae were clustered in one clade.http://dx.doi.org/10.1080/23802359.2020.1721350mitochondrial genomephylogeneticsflavoperla hatakeyamae |
| spellingShingle | Caihao Hao Guochang Wang Weihai Li Jinjun Cao The mitochondrial genome analysis of Flavoperla hatakeyamae (Plecoptera: Perlidae) Mitochondrial DNA. Part B. Resources mitochondrial genome phylogenetics flavoperla hatakeyamae |
| title | The mitochondrial genome analysis of Flavoperla hatakeyamae (Plecoptera: Perlidae) |
| title_full | The mitochondrial genome analysis of Flavoperla hatakeyamae (Plecoptera: Perlidae) |
| title_fullStr | The mitochondrial genome analysis of Flavoperla hatakeyamae (Plecoptera: Perlidae) |
| title_full_unstemmed | The mitochondrial genome analysis of Flavoperla hatakeyamae (Plecoptera: Perlidae) |
| title_short | The mitochondrial genome analysis of Flavoperla hatakeyamae (Plecoptera: Perlidae) |
| title_sort | mitochondrial genome analysis of flavoperla hatakeyamae plecoptera perlidae |
| topic | mitochondrial genome phylogenetics flavoperla hatakeyamae |
| url | http://dx.doi.org/10.1080/23802359.2020.1721350 |
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