Metabolic phenotyping of the human microbiome [version 1; peer review: 2 approved]

The human microbiome has been identified as having a key role in health and numerous diseases. Trillions of microbial cells and viral particles comprise the microbiome, each representing modifiable working elements of an intricate bioactive ecosystem. The significance of the human microbiome as it r...

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Bibliographic Details
Main Authors: Wiley Barton, Orla O'Sullivan, Paul D. Cotter
Format: Article
Language:English
Published: F1000 Research Ltd 2019-11-01
Series:F1000Research
Online Access:https://f1000research.com/articles/8-1956/v1
Description
Summary:The human microbiome has been identified as having a key role in health and numerous diseases. Trillions of microbial cells and viral particles comprise the microbiome, each representing modifiable working elements of an intricate bioactive ecosystem. The significance of the human microbiome as it relates to human biology has progressed through culture-dependent (for example, media-based methods) and, more recently, molecular (for example, genetic sequencing and metabolomic analysis) techniques. The latter have become increasingly popular and evolved from being used for taxonomic identification of microbiota to elucidation of functional capacity (sequencing) and metabolic activity (metabolomics). This review summarises key elements of the human microbiome and its metabolic capabilities within the context of health and disease.
ISSN:2046-1402