Gradient matching methods for computational inference in mechanistic models for systems biology: a review and comparative analysis

Parameter inference in mathematical models of biological pathways, expressed as coupled ordinary differential equations (ODEs), is a challenging problem in contemporary systems biology. Conventional methods involve repeatedly solving the ODEs by numerical integration, which is computationally onerou...

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Bibliographic Details
Main Authors: Benn eMacdonald, Dirk eHusmeier
Format: Article
Language:English
Published: Frontiers Media S.A. 2015-11-01
Series:Frontiers in Bioengineering and Biotechnology
Subjects:
Online Access:http://journal.frontiersin.org/Journal/10.3389/fbioe.2015.00180/full