The glycoside hydrolase gene family profile and microbial function of Debaryomyces hansenii Y4 during South-road dark tea fermentation
Microbes are crucial to the quality formation of Sichuan South-road Dark Tea (SSDT) during pile-fermentation, but their mechanism of action has not yet been elucidated. Here, the glycoside hydrolase (GH) gene family and microbial function of Debaryomyces hansenii Y4 during solid-state fermentation w...
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Frontiers Media S.A.
2023-07-01
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| Series: | Frontiers in Microbiology |
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| Online Access: | https://www.frontiersin.org/articles/10.3389/fmicb.2023.1229251/full |
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| author | Yao Zou Yao Zou Minqiang Liu Minqiang Liu Yuqing Lai Yuqing Lai Xuyi Liu Xuyi Liu Xian Li Xian Li Yimiao Li Yimiao Li Qian Tang Qian Tang Wei Xu Wei Xu |
| author_facet | Yao Zou Yao Zou Minqiang Liu Minqiang Liu Yuqing Lai Yuqing Lai Xuyi Liu Xuyi Liu Xian Li Xian Li Yimiao Li Yimiao Li Qian Tang Qian Tang Wei Xu Wei Xu |
| author_sort | Yao Zou |
| collection | DOAJ |
| description | Microbes are crucial to the quality formation of Sichuan South-road Dark Tea (SSDT) during pile-fermentation, but their mechanism of action has not yet been elucidated. Here, the glycoside hydrolase (GH) gene family and microbial function of Debaryomyces hansenii Y4 during solid-state fermentation were analyzed, and the results showed that many GH genes being distributed in comparatively abundant GH17, GH18, GH76, GH31, GH47, and GH2 were discovered in D. hansenii. They encoded beta-galactosidase, alpha-D-galactoside galactohydrolase, alpha-xylosidase, mannosidase, etc., and most of the GHs were located in the exocellular space and participated in the degradation of polysaccharides and oligosaccharides. D. hansenii Y4 could develop the mellow mouthfeel and “reddish brown” factors of SSDT via increasing the levels of water extracts, soluble sugars and amino acids but decreasing the tea polyphenols and caffeine levels, combined with altering the levels of thearubiins and brown index. It may facilitate the isomerization between epicatechin gallate and catechin gallate. Moreover, the expression levels of DEHA2G24860g (Beta-galactosidase gene) and DEHA2G08602g (Mannan endo-1,6-alpha-mannosidase DFG5 gene) were sharply up-regulated in fermentative anaphase, and they were significantly and negatively correlated with epicatechin content, especially, the expression of DEHA2G08602g was significantly and negatively correlated with catechin gallate level. It was hypothesized that D. hansenii Y4 is likely to be an important functional microbe targeting carbohydrate destruction and catechin transformation during SSDT pile-fermentation, with DEHA2G08602g as a key thermotolerant functional gene. |
| first_indexed | 2024-03-13T00:06:45Z |
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| id | doaj.art-5e9c3e0b172547fda17254882c2574c7 |
| institution | Directory Open Access Journal |
| issn | 1664-302X |
| language | English |
| last_indexed | 2024-03-13T00:06:45Z |
| publishDate | 2023-07-01 |
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| series | Frontiers in Microbiology |
| spelling | doaj.art-5e9c3e0b172547fda17254882c2574c72023-07-12T23:41:45ZengFrontiers Media S.A.Frontiers in Microbiology1664-302X2023-07-011410.3389/fmicb.2023.12292511229251The glycoside hydrolase gene family profile and microbial function of Debaryomyces hansenii Y4 during South-road dark tea fermentationYao Zou0Yao Zou1Minqiang Liu2Minqiang Liu3Yuqing Lai4Yuqing Lai5Xuyi Liu6Xuyi Liu7Xian Li8Xian Li9Yimiao Li10Yimiao Li11Qian Tang12Qian Tang13Wei Xu14Wei Xu15Department of Tea Science, College of Horticulture, Sichuan Agricultural University, Chengdu, ChinaTea Refining and Innovation Key Laboratory of Sichuan Province, Chengdu, ChinaDepartment of Tea Science, College of Horticulture, Sichuan Agricultural University, Chengdu, ChinaTea Refining and Innovation Key Laboratory of Sichuan Province, Chengdu, ChinaDepartment of Tea Science, College of Horticulture, Sichuan Agricultural University, Chengdu, ChinaTea Refining and Innovation Key Laboratory of Sichuan Province, Chengdu, ChinaDepartment of Tea Science, College of Horticulture, Sichuan Agricultural University, Chengdu, ChinaTea Refining and Innovation Key Laboratory of Sichuan Province, Chengdu, ChinaDepartment of Tea Science, College of Horticulture, Sichuan Agricultural University, Chengdu, ChinaTea Refining and Innovation Key Laboratory of Sichuan Province, Chengdu, ChinaDepartment of Tea Science, College of Horticulture, Sichuan Agricultural University, Chengdu, ChinaTea Refining and Innovation Key Laboratory of Sichuan Province, Chengdu, ChinaDepartment of Tea Science, College of Horticulture, Sichuan Agricultural University, Chengdu, ChinaTea Refining and Innovation Key Laboratory of Sichuan Province, Chengdu, ChinaDepartment of Tea Science, College of Horticulture, Sichuan Agricultural University, Chengdu, ChinaTea Refining and Innovation Key Laboratory of Sichuan Province, Chengdu, ChinaMicrobes are crucial to the quality formation of Sichuan South-road Dark Tea (SSDT) during pile-fermentation, but their mechanism of action has not yet been elucidated. Here, the glycoside hydrolase (GH) gene family and microbial function of Debaryomyces hansenii Y4 during solid-state fermentation were analyzed, and the results showed that many GH genes being distributed in comparatively abundant GH17, GH18, GH76, GH31, GH47, and GH2 were discovered in D. hansenii. They encoded beta-galactosidase, alpha-D-galactoside galactohydrolase, alpha-xylosidase, mannosidase, etc., and most of the GHs were located in the exocellular space and participated in the degradation of polysaccharides and oligosaccharides. D. hansenii Y4 could develop the mellow mouthfeel and “reddish brown” factors of SSDT via increasing the levels of water extracts, soluble sugars and amino acids but decreasing the tea polyphenols and caffeine levels, combined with altering the levels of thearubiins and brown index. It may facilitate the isomerization between epicatechin gallate and catechin gallate. Moreover, the expression levels of DEHA2G24860g (Beta-galactosidase gene) and DEHA2G08602g (Mannan endo-1,6-alpha-mannosidase DFG5 gene) were sharply up-regulated in fermentative anaphase, and they were significantly and negatively correlated with epicatechin content, especially, the expression of DEHA2G08602g was significantly and negatively correlated with catechin gallate level. It was hypothesized that D. hansenii Y4 is likely to be an important functional microbe targeting carbohydrate destruction and catechin transformation during SSDT pile-fermentation, with DEHA2G08602g as a key thermotolerant functional gene.https://www.frontiersin.org/articles/10.3389/fmicb.2023.1229251/fullDebaryomyces hansenii Y4Sichuan South-road dark teaglycoside hydrolase gene familyfermentationquality |
| spellingShingle | Yao Zou Yao Zou Minqiang Liu Minqiang Liu Yuqing Lai Yuqing Lai Xuyi Liu Xuyi Liu Xian Li Xian Li Yimiao Li Yimiao Li Qian Tang Qian Tang Wei Xu Wei Xu The glycoside hydrolase gene family profile and microbial function of Debaryomyces hansenii Y4 during South-road dark tea fermentation Frontiers in Microbiology Debaryomyces hansenii Y4 Sichuan South-road dark tea glycoside hydrolase gene family fermentation quality |
| title | The glycoside hydrolase gene family profile and microbial function of Debaryomyces hansenii Y4 during South-road dark tea fermentation |
| title_full | The glycoside hydrolase gene family profile and microbial function of Debaryomyces hansenii Y4 during South-road dark tea fermentation |
| title_fullStr | The glycoside hydrolase gene family profile and microbial function of Debaryomyces hansenii Y4 during South-road dark tea fermentation |
| title_full_unstemmed | The glycoside hydrolase gene family profile and microbial function of Debaryomyces hansenii Y4 during South-road dark tea fermentation |
| title_short | The glycoside hydrolase gene family profile and microbial function of Debaryomyces hansenii Y4 during South-road dark tea fermentation |
| title_sort | glycoside hydrolase gene family profile and microbial function of debaryomyces hansenii y4 during south road dark tea fermentation |
| topic | Debaryomyces hansenii Y4 Sichuan South-road dark tea glycoside hydrolase gene family fermentation quality |
| url | https://www.frontiersin.org/articles/10.3389/fmicb.2023.1229251/full |
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