Optimal construction of a functional interaction network from pooled library CRISPR fitness screens
Abstract Background Functional interaction networks, where edges connect genes likely to operate in the same biological process or pathway, can be inferred from CRISPR knockout screens in cancer cell lines. Genes with similar knockout fitness profiles across a sufficiently diverse set of cell line s...
Main Authors: | Veronica Gheorghe, Traver Hart |
---|---|
Format: | Article |
Language: | English |
Published: |
BMC
2022-11-01
|
Series: | BMC Bioinformatics |
Subjects: | |
Online Access: | https://doi.org/10.1186/s12859-022-05078-y |
Similar Items
-
Coessential-connection by microwave plasma chemical vapor deposition: a common process towards wafer scale single crystal diamond
by: Guoyang Shu, et al.
Published: (2022-01-01) -
Screening of Lymphoma Radiotherapy-Resistant Genes with CRISPR Activation Library
by: Luo BH, et al.
Published: (2023-01-01) -
Pooled genome-wide CRISPR activation screening for rapamycin resistance genes in Drosophila cells
by: Baolong Xia, et al.
Published: (2023-04-01) -
Development and implementation of a Type I-C CRISPR-based programmable repression system for Neisseria gonorrhoeae
by: Wendy E. Geslewitz, et al.
Published: (2024-02-01) -
Fitness effects of CRISPR endonucleases in Drosophila melanogaster populations
by: Anna M Langmüller, et al.
Published: (2022-09-01)