Perspective on intestinal microbiota temporal changes of herbal additives treated shrimp in a natural aquaculture setting
Shrimp is an important aquaculture species worldwide. The use of antibiotics to suppress disease outbreaks has led to antibiotic resistance; however, probiotics or natural herbal additives can enhance the health of farmed shrimp. In this study, the effects of formulations containing natural herbs an...
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| Format: | Article |
| Language: | English |
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Frontiers Media S.A.
2024-03-01
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| Series: | Frontiers in Marine Science |
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| Online Access: | https://www.frontiersin.org/articles/10.3389/fmars.2024.1332585/full |
| _version_ | 1797277147879964672 |
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| author | Xu-Yin Lin Xu-Yin Lin Yi-Jia Shih Xian-Jing Zhang You-Shu Cai Xiao-Wen Zhou Jung-Sheng Chen |
| author_facet | Xu-Yin Lin Xu-Yin Lin Yi-Jia Shih Xian-Jing Zhang You-Shu Cai Xiao-Wen Zhou Jung-Sheng Chen |
| author_sort | Xu-Yin Lin |
| collection | DOAJ |
| description | Shrimp is an important aquaculture species worldwide. The use of antibiotics to suppress disease outbreaks has led to antibiotic resistance; however, probiotics or natural herbal additives can enhance the health of farmed shrimp. In this study, the effects of formulations containing natural herbs and probiotics on shrimp farming were explored. Following indoor shrimp farming, the shrimp were returned to outdoor natural ponds for 1 week in the presence of a fermented probiotic product. The gut microbiota was surveyed using 16S rRNA gene sequencing at 1, 2, 3, and 8 weeks after the natural pond release. The results showed that Vibrio-related bacterial genera increased significantly in the shrimp intestinal microbiota at 2 weeks and were particularly high at 3 weeks after natural pond release. The phyla Firmicutes, Bacteroidetes, Vibrio-related bacteria, and the genus Cetobacterium emerged as crucial bacteria linked to shrimp health and growth. Overall, the diversity of the shrimp intestinal microbiota was lower upon release into the natural pond. However, this outcome may be associated with dysbiosis or influenced by the natural environment. Further research is warranted to substantiate these findings. A perspective on the shrimp gut microbiota provides important information for aquaculture management and explains the implementation of control measures. |
| first_indexed | 2024-03-07T15:44:26Z |
| format | Article |
| id | doaj.art-5f0d96ddc27143c09551d8fbb1808211 |
| institution | Directory Open Access Journal |
| issn | 2296-7745 |
| language | English |
| last_indexed | 2024-03-07T15:44:26Z |
| publishDate | 2024-03-01 |
| publisher | Frontiers Media S.A. |
| record_format | Article |
| series | Frontiers in Marine Science |
| spelling | doaj.art-5f0d96ddc27143c09551d8fbb18082112024-03-05T04:59:13ZengFrontiers Media S.A.Frontiers in Marine Science2296-77452024-03-011110.3389/fmars.2024.13325851332585Perspective on intestinal microbiota temporal changes of herbal additives treated shrimp in a natural aquaculture settingXu-Yin Lin0Xu-Yin Lin1Yi-Jia Shih2Xian-Jing Zhang3You-Shu Cai4Xiao-Wen Zhou5Jung-Sheng Chen6School of Marine Biology, Xiamen Ocean Vocational College, Xiamen, ChinaXiamen Key Laboratory of Intelligent Fishery, Jimei University, Xiamen, ChinaFisheries College, Jimei University, Xiamen, ChinaSchool of Marine Biology, Xiamen Ocean Vocational College, Xiamen, ChinaHaiyo Biotechnology Co., LTD, Xiamen, ChinaAgricultural and Rural Development Service Center of Pingtan Comprehensive Pilot Zone, Fuzhou, ChinaDepartment for Medical Research, E-Da Hospital, I-Shou University, Koahsiung City, TaiwanShrimp is an important aquaculture species worldwide. The use of antibiotics to suppress disease outbreaks has led to antibiotic resistance; however, probiotics or natural herbal additives can enhance the health of farmed shrimp. In this study, the effects of formulations containing natural herbs and probiotics on shrimp farming were explored. Following indoor shrimp farming, the shrimp were returned to outdoor natural ponds for 1 week in the presence of a fermented probiotic product. The gut microbiota was surveyed using 16S rRNA gene sequencing at 1, 2, 3, and 8 weeks after the natural pond release. The results showed that Vibrio-related bacterial genera increased significantly in the shrimp intestinal microbiota at 2 weeks and were particularly high at 3 weeks after natural pond release. The phyla Firmicutes, Bacteroidetes, Vibrio-related bacteria, and the genus Cetobacterium emerged as crucial bacteria linked to shrimp health and growth. Overall, the diversity of the shrimp intestinal microbiota was lower upon release into the natural pond. However, this outcome may be associated with dysbiosis or influenced by the natural environment. Further research is warranted to substantiate these findings. A perspective on the shrimp gut microbiota provides important information for aquaculture management and explains the implementation of control measures.https://www.frontiersin.org/articles/10.3389/fmars.2024.1332585/fullshrimpfermentation product16S rRNA gene sequencinggut microbiotavibrio related bacteria |
| spellingShingle | Xu-Yin Lin Xu-Yin Lin Yi-Jia Shih Xian-Jing Zhang You-Shu Cai Xiao-Wen Zhou Jung-Sheng Chen Perspective on intestinal microbiota temporal changes of herbal additives treated shrimp in a natural aquaculture setting Frontiers in Marine Science shrimp fermentation product 16S rRNA gene sequencing gut microbiota vibrio related bacteria |
| title | Perspective on intestinal microbiota temporal changes of herbal additives treated shrimp in a natural aquaculture setting |
| title_full | Perspective on intestinal microbiota temporal changes of herbal additives treated shrimp in a natural aquaculture setting |
| title_fullStr | Perspective on intestinal microbiota temporal changes of herbal additives treated shrimp in a natural aquaculture setting |
| title_full_unstemmed | Perspective on intestinal microbiota temporal changes of herbal additives treated shrimp in a natural aquaculture setting |
| title_short | Perspective on intestinal microbiota temporal changes of herbal additives treated shrimp in a natural aquaculture setting |
| title_sort | perspective on intestinal microbiota temporal changes of herbal additives treated shrimp in a natural aquaculture setting |
| topic | shrimp fermentation product 16S rRNA gene sequencing gut microbiota vibrio related bacteria |
| url | https://www.frontiersin.org/articles/10.3389/fmars.2024.1332585/full |
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