Moving Average-Based Multitasking In Silico Classification Modeling: Where Do We Stand and What Is Next?

Conventional in silico modeling is often viewed as ‘one-target’ or ‘single-task’ computer-aided modeling since it mainly relies on forecasting an endpoint of interest from similar input data. Multitasking or multitarget in silico modeling, in contrast, embraces a set of computational techniques that...

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Main Authors: Amit Kumar Halder, Ana S. Moura, Maria Natália D. S. Cordeiro
Format: Article
Language:English
Published: MDPI AG 2022-04-01
Series:International Journal of Molecular Sciences
Subjects:
Online Access:https://www.mdpi.com/1422-0067/23/9/4937
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author Amit Kumar Halder
Ana S. Moura
Maria Natália D. S. Cordeiro
author_facet Amit Kumar Halder
Ana S. Moura
Maria Natália D. S. Cordeiro
author_sort Amit Kumar Halder
collection DOAJ
description Conventional in silico modeling is often viewed as ‘one-target’ or ‘single-task’ computer-aided modeling since it mainly relies on forecasting an endpoint of interest from similar input data. Multitasking or multitarget in silico modeling, in contrast, embraces a set of computational techniques that efficiently integrate multiple types of input data for setting up unique in silico models able to predict the outcome(s) relating to various experimental and/or theoretical conditions. The latter, specifically, based upon the Box–Jenkins moving average approach, has been applied in the last decade to several research fields including drug and materials design, environmental sciences, and nanotechnology. The present review discusses the current status of multitasking computer-aided modeling efforts, meanwhile describing both the existing challenges and future opportunities of its underlying techniques. Some important applications are also discussed to exemplify the ability of multitasking modeling in deriving holistic and reliable in silico classification-based models as well as in designing new chemical entities, either through fragment-based design or virtual screening. Focus will also be given to some software recently developed to automate and accelerate such types of modeling. Overall, this review may serve as a guideline for researchers to grasp the scope of multitasking computer-aided modeling as a promising in silico tool.
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spelling doaj.art-5f2daffb772f4a6a8667784ba94a71f12023-11-23T08:24:28ZengMDPI AGInternational Journal of Molecular Sciences1661-65961422-00672022-04-01239493710.3390/ijms23094937Moving Average-Based Multitasking In Silico Classification Modeling: Where Do We Stand and What Is Next?Amit Kumar Halder0Ana S. Moura1Maria Natália D. S. Cordeiro2LAQV@REQUIMTE, Faculty of Sciences, University of Porto, 4169-007 Porto, PortugalLAQV@REQUIMTE, Faculty of Sciences, University of Porto, 4169-007 Porto, PortugalLAQV@REQUIMTE, Faculty of Sciences, University of Porto, 4169-007 Porto, PortugalConventional in silico modeling is often viewed as ‘one-target’ or ‘single-task’ computer-aided modeling since it mainly relies on forecasting an endpoint of interest from similar input data. Multitasking or multitarget in silico modeling, in contrast, embraces a set of computational techniques that efficiently integrate multiple types of input data for setting up unique in silico models able to predict the outcome(s) relating to various experimental and/or theoretical conditions. The latter, specifically, based upon the Box–Jenkins moving average approach, has been applied in the last decade to several research fields including drug and materials design, environmental sciences, and nanotechnology. The present review discusses the current status of multitasking computer-aided modeling efforts, meanwhile describing both the existing challenges and future opportunities of its underlying techniques. Some important applications are also discussed to exemplify the ability of multitasking modeling in deriving holistic and reliable in silico classification-based models as well as in designing new chemical entities, either through fragment-based design or virtual screening. Focus will also be given to some software recently developed to automate and accelerate such types of modeling. Overall, this review may serve as a guideline for researchers to grasp the scope of multitasking computer-aided modeling as a promising in silico tool.https://www.mdpi.com/1422-0067/23/9/4937multitasking in silico modelingmoving average approachvirtual screeningsoftware
spellingShingle Amit Kumar Halder
Ana S. Moura
Maria Natália D. S. Cordeiro
Moving Average-Based Multitasking In Silico Classification Modeling: Where Do We Stand and What Is Next?
International Journal of Molecular Sciences
multitasking in silico modeling
moving average approach
virtual screening
software
title Moving Average-Based Multitasking In Silico Classification Modeling: Where Do We Stand and What Is Next?
title_full Moving Average-Based Multitasking In Silico Classification Modeling: Where Do We Stand and What Is Next?
title_fullStr Moving Average-Based Multitasking In Silico Classification Modeling: Where Do We Stand and What Is Next?
title_full_unstemmed Moving Average-Based Multitasking In Silico Classification Modeling: Where Do We Stand and What Is Next?
title_short Moving Average-Based Multitasking In Silico Classification Modeling: Where Do We Stand and What Is Next?
title_sort moving average based multitasking in silico classification modeling where do we stand and what is next
topic multitasking in silico modeling
moving average approach
virtual screening
software
url https://www.mdpi.com/1422-0067/23/9/4937
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