The complete chloroplast genome of Clivia miniata
The complete chloroplast genome of Clivia miniata was assembled in this study. The genome comprised 158,114 bp in length. The GC content was 37.97%. A total of 133 genes are successfully annotated, including 87 protein-coding genes, 38 tRNA, and 8 rRNA genes. Seventeen protein-coding genes (tpF, ndh...
| Main Authors: | , , , |
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| Format: | Article |
| Language: | English |
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Taylor & Francis Group
2020-01-01
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| Series: | Mitochondrial DNA. Part B. Resources |
| Subjects: | |
| Online Access: | http://dx.doi.org/10.1080/23802359.2020.1721033 |
| _version_ | 1827773051622653952 |
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| author | Wei Wang Fan Zhang Chenhe Li Xudan Zhou |
| author_facet | Wei Wang Fan Zhang Chenhe Li Xudan Zhou |
| author_sort | Wei Wang |
| collection | DOAJ |
| description | The complete chloroplast genome of Clivia miniata was assembled in this study. The genome comprised 158,114 bp in length. The GC content was 37.97%. A total of 133 genes are successfully annotated, including 87 protein-coding genes, 38 tRNA, and 8 rRNA genes. Seventeen protein-coding genes (tpF, ndhA, ndhB, petB, petD, rpl16, rpl2, rps16, trnA-UGC, trnG-UCC, trnI-GAU, trnK-UUU, trnL-UAA, trnV-UAC, clpP, rps12, ycf3) contained one or two introns. Phylogenetic tree analysis revealed that the Clivia miniata is the closest relative with Lycoris radiata, Lycoris squamigera, and Narcissus poeticus. |
| first_indexed | 2024-03-11T13:17:29Z |
| format | Article |
| id | doaj.art-6036c5c2e00845e1abd8846611a6ef98 |
| institution | Directory Open Access Journal |
| issn | 2380-2359 |
| language | English |
| last_indexed | 2024-03-11T13:17:29Z |
| publishDate | 2020-01-01 |
| publisher | Taylor & Francis Group |
| record_format | Article |
| series | Mitochondrial DNA. Part B. Resources |
| spelling | doaj.art-6036c5c2e00845e1abd8846611a6ef982023-11-03T11:00:22ZengTaylor & Francis GroupMitochondrial DNA. Part B. Resources2380-23592020-01-01511011101210.1080/23802359.2020.17210331721033The complete chloroplast genome of Clivia miniataWei Wang0Fan Zhang1Chenhe Li2Xudan Zhou3College of Horticulture, Jilin Agricultural UniversityCollege of Horticulture, Jilin Agricultural UniversityCollege of Horticulture, Jilin Agricultural UniversityCollege of Horticulture, Jilin Agricultural UniversityThe complete chloroplast genome of Clivia miniata was assembled in this study. The genome comprised 158,114 bp in length. The GC content was 37.97%. A total of 133 genes are successfully annotated, including 87 protein-coding genes, 38 tRNA, and 8 rRNA genes. Seventeen protein-coding genes (tpF, ndhA, ndhB, petB, petD, rpl16, rpl2, rps16, trnA-UGC, trnG-UCC, trnI-GAU, trnK-UUU, trnL-UAA, trnV-UAC, clpP, rps12, ycf3) contained one or two introns. Phylogenetic tree analysis revealed that the Clivia miniata is the closest relative with Lycoris radiata, Lycoris squamigera, and Narcissus poeticus.http://dx.doi.org/10.1080/23802359.2020.1721033clivia miniatachloroplast genomeamaryllidaceae |
| spellingShingle | Wei Wang Fan Zhang Chenhe Li Xudan Zhou The complete chloroplast genome of Clivia miniata Mitochondrial DNA. Part B. Resources clivia miniata chloroplast genome amaryllidaceae |
| title | The complete chloroplast genome of Clivia miniata |
| title_full | The complete chloroplast genome of Clivia miniata |
| title_fullStr | The complete chloroplast genome of Clivia miniata |
| title_full_unstemmed | The complete chloroplast genome of Clivia miniata |
| title_short | The complete chloroplast genome of Clivia miniata |
| title_sort | complete chloroplast genome of clivia miniata |
| topic | clivia miniata chloroplast genome amaryllidaceae |
| url | http://dx.doi.org/10.1080/23802359.2020.1721033 |
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