Systematic omics analysis identifies CCR6 as a therapeutic target to overcome cancer resistance to EGFR inhibitors

Summary: Epidermal growth factor receptor inhibitors (EGFRi) have exhibited promising clinical outcomes in the treatment of various cancers. However, their widespread application has been limited by low patient eligibility and the emergence of resistance. Leveraging a multi-omics approach (>1000...

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Main Authors: Eun-Ji Kwon, Hyuk-Jin Cha, Haeseung Lee
Format: Article
Language:English
Published: Elsevier 2024-04-01
Series:iScience
Subjects:
Online Access:http://www.sciencedirect.com/science/article/pii/S2589004224006692
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author Eun-Ji Kwon
Hyuk-Jin Cha
Haeseung Lee
author_facet Eun-Ji Kwon
Hyuk-Jin Cha
Haeseung Lee
author_sort Eun-Ji Kwon
collection DOAJ
description Summary: Epidermal growth factor receptor inhibitors (EGFRi) have exhibited promising clinical outcomes in the treatment of various cancers. However, their widespread application has been limited by low patient eligibility and the emergence of resistance. Leveraging a multi-omics approach (>1000 cancer cell lines), we explored molecular signatures linked to EGFRi responsiveness and found that expression signatures involved in the estrogen response could recapitulate cancer cell dependency on EGFR, a phenomenon not solely attributable to EGFR-activating mutations. By correlating genome-wide function screening data with EGFRi responses, we identified chemokine receptor 6 (CCR6) as a potential druggable target to mitigate EGFRi resistance. In isogenic cell models, pharmacological inhibition of CCR6 effectively reversed acquired EGFRi resistance, disrupting mitochondrial oxidative phosphorylation, a cellular process commonly associated with therapy resistance. Our data-driven strategy unveils drug-response biomarkers and therapeutic targets for resistance, thus potentially expanding EGFRi applicability and efficacy.
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spelling doaj.art-60e8dc7c49cd4053824e4b16613841e52024-03-22T05:40:25ZengElsevieriScience2589-00422024-04-01274109448Systematic omics analysis identifies CCR6 as a therapeutic target to overcome cancer resistance to EGFR inhibitorsEun-Ji Kwon0Hyuk-Jin Cha1Haeseung Lee2College of Pharmacy, Seoul National University, Seoul 08826, Republic of KoreaCollege of Pharmacy, Seoul National University, Seoul 08826, Republic of Korea; Corresponding authorDepartment of Pharmacy, College of Pharmacy and Research Institute for Drug Development, Pusan National University, Busan 46241, Republic of Korea; Corresponding authorSummary: Epidermal growth factor receptor inhibitors (EGFRi) have exhibited promising clinical outcomes in the treatment of various cancers. However, their widespread application has been limited by low patient eligibility and the emergence of resistance. Leveraging a multi-omics approach (>1000 cancer cell lines), we explored molecular signatures linked to EGFRi responsiveness and found that expression signatures involved in the estrogen response could recapitulate cancer cell dependency on EGFR, a phenomenon not solely attributable to EGFR-activating mutations. By correlating genome-wide function screening data with EGFRi responses, we identified chemokine receptor 6 (CCR6) as a potential druggable target to mitigate EGFRi resistance. In isogenic cell models, pharmacological inhibition of CCR6 effectively reversed acquired EGFRi resistance, disrupting mitochondrial oxidative phosphorylation, a cellular process commonly associated with therapy resistance. Our data-driven strategy unveils drug-response biomarkers and therapeutic targets for resistance, thus potentially expanding EGFRi applicability and efficacy.http://www.sciencedirect.com/science/article/pii/S2589004224006692Integrative aspects of cell biologyCancer systems biologyCancerOmics
spellingShingle Eun-Ji Kwon
Hyuk-Jin Cha
Haeseung Lee
Systematic omics analysis identifies CCR6 as a therapeutic target to overcome cancer resistance to EGFR inhibitors
iScience
Integrative aspects of cell biology
Cancer systems biology
Cancer
Omics
title Systematic omics analysis identifies CCR6 as a therapeutic target to overcome cancer resistance to EGFR inhibitors
title_full Systematic omics analysis identifies CCR6 as a therapeutic target to overcome cancer resistance to EGFR inhibitors
title_fullStr Systematic omics analysis identifies CCR6 as a therapeutic target to overcome cancer resistance to EGFR inhibitors
title_full_unstemmed Systematic omics analysis identifies CCR6 as a therapeutic target to overcome cancer resistance to EGFR inhibitors
title_short Systematic omics analysis identifies CCR6 as a therapeutic target to overcome cancer resistance to EGFR inhibitors
title_sort systematic omics analysis identifies ccr6 as a therapeutic target to overcome cancer resistance to egfr inhibitors
topic Integrative aspects of cell biology
Cancer systems biology
Cancer
Omics
url http://www.sciencedirect.com/science/article/pii/S2589004224006692
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AT haeseunglee systematicomicsanalysisidentifiesccr6asatherapeutictargettoovercomecancerresistancetoegfrinhibitors