The Isolation of a Novel <em>Streptomyces</em> sp. CJ13 from a Traditional Irish Folk Medicine Alkaline Grassland Soil that Inhibits Multiresistant Pathogens and Yeasts

The World Health Organization recently stated that new sources of antibiotics are urgently required to stem the global spread of antibiotic resistance, especially in multiresistant Gram-negative bacteria. Although it was thought that many of the original sources of antibiotics were exhausted, innova...

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Main Authors: Gerry A. Quinn, Alyaa M. Abdelhameed, Nada K. Alharbi, Diego Cobice, Simms A. Adu, Martin T. Swain, Helena Carla Castro, Paul D. Facey, Hamid A. Bakshi, Murtaza M. Tambuwala, Ibrahim M. Banat
Format: Article
Language:English
Published: MDPI AG 2020-12-01
Series:Applied Sciences
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Online Access:https://www.mdpi.com/2076-3417/11/1/173
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Summary:The World Health Organization recently stated that new sources of antibiotics are urgently required to stem the global spread of antibiotic resistance, especially in multiresistant Gram-negative bacteria. Although it was thought that many of the original sources of antibiotics were exhausted, innovative research has revealed promising new sources of antibiotic discovery in traditional medicine associated with <i>Streptomyces</i>. In this work we investigated the potential of a specific limestone grassland soil, associated with Irish folk medicine, as a new source of antimicrobial discovery. Using selective enrichment and isolation techniques on a limestone grassland soil sample obtained from Boho, West Fermanagh, we isolated <i>Streptomyces</i> sp. CJ13. This bacterium inhibited the growth of a broad range of pathogens in vitro including Gram positive <i>Staphylococcus aureus</i> (MRSA 43300) and Gram negative multiresistant <i>Pseudomonas aeruginosa</i> (PA01), as well as the anaerobic bacteria <i>Propionibacterium acnes</i> and the yeast <i>Starmerella bombicola</i>. Genome sequencing and phylogenetic analysis revealed <i>Streptomyces</i> sp. CJ13 to be closely related to an unclassified <i>Streptomyces</i> sp. MJM1172, <i>Streptomyces</i> sp. Mg1 and two species known as <i>Streptomyces</i> sp. ICC1 and ICC4 from a karst region in British Columbia. The closest type species to <i>Streptomyces</i> sp. CJ13 was <i>Streptomyces lavendulae</i> subspecies <i>lavendulae</i>. Analysis of <i>Streptomyces</i> sp. CJ13 whole genome sequence using the secondary metabolite prediction tool antiSMASH revealed similarities to several antibiotic gene synthesis clusters including salinichelin, mediomycin A, weishanmycin, combamide, heat stable antifungal factor and SAL-2242. These results demonstrate the potential of this alkaline grassland soil as a new resource for the discovery of a broad range of antimicrobial compounds including those effective against multiresistant Gram negative bacteria.
ISSN:2076-3417