The complete chloroplast genome sequence of Taxillus yadoriki (Loranthaceae): a hemi-parasitic evergreen shrub in East Asia
Taxillus yadoriki (Loranthaceae) is a hemiparasitic evergreen shrub distributed in Korea and Japan. We report the complete chloroplast genome of T. yadoriki to provide insight into the phylogenetic relationship of Loranthaceae. This genome is 122,192 bp long, with two IR regions (22,756 bp each) tha...
| Main Authors: | , , , |
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| Format: | Article |
| Language: | English |
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Taylor & Francis Group
2020-07-01
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| Series: | Mitochondrial DNA. Part B. Resources |
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| Online Access: | http://dx.doi.org/10.1080/23802359.2020.1806755 |
| _version_ | 1797639072097763328 |
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| author | Won-Bum Cho Eun-Kyeong Han Dong Chan Son Jung-Hyun Lee |
| author_facet | Won-Bum Cho Eun-Kyeong Han Dong Chan Son Jung-Hyun Lee |
| author_sort | Won-Bum Cho |
| collection | DOAJ |
| description | Taxillus yadoriki (Loranthaceae) is a hemiparasitic evergreen shrub distributed in Korea and Japan. We report the complete chloroplast genome of T. yadoriki to provide insight into the phylogenetic relationship of Loranthaceae. This genome is 122,192 bp long, with two IR regions (22,756 bp each) that separate a large single-copy (LSC) region (70,628 bp) and a small single-copy (SSC) region (6052 bp). It contains 109 genes that encode 68 proteins, 8 rRNAs, and 33 tRNAs. All of ndh genes have been lost and the SSC region consists of only four genes similar to other Taxillus species. In ML phylogenetic, monophyly of Taxillus was strongly supported with high bootstrap value and formed a sister group with Scurrula. |
| first_indexed | 2024-03-11T13:12:34Z |
| format | Article |
| id | doaj.art-61c335a73d36457e84aaa741d4c2fefb |
| institution | Directory Open Access Journal |
| issn | 2380-2359 |
| language | English |
| last_indexed | 2024-03-11T13:12:34Z |
| publishDate | 2020-07-01 |
| publisher | Taylor & Francis Group |
| record_format | Article |
| series | Mitochondrial DNA. Part B. Resources |
| spelling | doaj.art-61c335a73d36457e84aaa741d4c2fefb2023-11-03T14:00:32ZengTaylor & Francis GroupMitochondrial DNA. Part B. Resources2380-23592020-07-01533172317310.1080/23802359.2020.18067551806755The complete chloroplast genome sequence of Taxillus yadoriki (Loranthaceae): a hemi-parasitic evergreen shrub in East AsiaWon-Bum Cho0Eun-Kyeong Han1Dong Chan Son2Jung-Hyun Lee3Department of Biology Education, Chonnam National UniversityDepartment of Biology Education, Chonnam National UniversityDivision of Forest Biodiversity and Herbarium, Korea National ArboretumDepartment of Biology Education, Chonnam National UniversityTaxillus yadoriki (Loranthaceae) is a hemiparasitic evergreen shrub distributed in Korea and Japan. We report the complete chloroplast genome of T. yadoriki to provide insight into the phylogenetic relationship of Loranthaceae. This genome is 122,192 bp long, with two IR regions (22,756 bp each) that separate a large single-copy (LSC) region (70,628 bp) and a small single-copy (SSC) region (6052 bp). It contains 109 genes that encode 68 proteins, 8 rRNAs, and 33 tRNAs. All of ndh genes have been lost and the SSC region consists of only four genes similar to other Taxillus species. In ML phylogenetic, monophyly of Taxillus was strongly supported with high bootstrap value and formed a sister group with Scurrula.http://dx.doi.org/10.1080/23802359.2020.1806755chloroplast genomegene lossphylogenetic analysistaxillis |
| spellingShingle | Won-Bum Cho Eun-Kyeong Han Dong Chan Son Jung-Hyun Lee The complete chloroplast genome sequence of Taxillus yadoriki (Loranthaceae): a hemi-parasitic evergreen shrub in East Asia Mitochondrial DNA. Part B. Resources chloroplast genome gene loss phylogenetic analysis taxillis |
| title | The complete chloroplast genome sequence of Taxillus yadoriki (Loranthaceae): a hemi-parasitic evergreen shrub in East Asia |
| title_full | The complete chloroplast genome sequence of Taxillus yadoriki (Loranthaceae): a hemi-parasitic evergreen shrub in East Asia |
| title_fullStr | The complete chloroplast genome sequence of Taxillus yadoriki (Loranthaceae): a hemi-parasitic evergreen shrub in East Asia |
| title_full_unstemmed | The complete chloroplast genome sequence of Taxillus yadoriki (Loranthaceae): a hemi-parasitic evergreen shrub in East Asia |
| title_short | The complete chloroplast genome sequence of Taxillus yadoriki (Loranthaceae): a hemi-parasitic evergreen shrub in East Asia |
| title_sort | complete chloroplast genome sequence of taxillus yadoriki loranthaceae a hemi parasitic evergreen shrub in east asia |
| topic | chloroplast genome gene loss phylogenetic analysis taxillis |
| url | http://dx.doi.org/10.1080/23802359.2020.1806755 |
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