Characterization of the complete mitochondrial genome of Ilisha striatula (Clupeiformes, Pristigasteridae) and phylogenetic studies of Clupeiformes
In this study, the complete mitochondrial genome of Ilisha striatula is presented, and we also discussed its mitochondrial characteristics. The full length of the mitochondrial genome was 16,847 bp, including 13 protein-coding genes (PCGs), 2 ribosomal RNAs, 22 transfer RNA genes, one non-coding con...
| Main Authors: | , , , , |
|---|---|
| Format: | Article |
| Language: | English |
| Published: |
Taylor & Francis Group
2021-01-01
|
| Series: | Mitochondrial DNA. Part B. Resources |
| Subjects: | |
| Online Access: | http://dx.doi.org/10.1080/23802359.2020.1861996 |
| _version_ | 1827772605513334784 |
|---|---|
| author | Jiaqi Fang Kehua Zhu Lele Yang Liqin Liu Lv Zhengming |
| author_facet | Jiaqi Fang Kehua Zhu Lele Yang Liqin Liu Lv Zhengming |
| author_sort | Jiaqi Fang |
| collection | DOAJ |
| description | In this study, the complete mitochondrial genome of Ilisha striatula is presented, and we also discussed its mitochondrial characteristics. The full length of the mitochondrial genome was 16,847 bp, including 13 protein-coding genes (PCGs), 2 ribosomal RNAs, 22 transfer RNA genes, one non-coding control region (CR), and one origin of replication on the light-strand. The total nucleotide composition of the mitochondrial genome was 31.11% A, 24.62% T, 29.10% C, 15.16% G, and AT was 55.73%. The phylogenetic tree based on the ML method supported the placement of I. striatula in a close relationship with I. elongata. These data contribute to a better understanding of the systematics of the Pristigasteridae. |
| first_indexed | 2024-03-11T13:11:36Z |
| format | Article |
| id | doaj.art-61ed66358f9e47268fa59f4196b1600e |
| institution | Directory Open Access Journal |
| issn | 2380-2359 |
| language | English |
| last_indexed | 2024-03-11T13:11:36Z |
| publishDate | 2021-01-01 |
| publisher | Taylor & Francis Group |
| record_format | Article |
| series | Mitochondrial DNA. Part B. Resources |
| spelling | doaj.art-61ed66358f9e47268fa59f4196b1600e2023-11-03T14:08:18ZengTaylor & Francis GroupMitochondrial DNA. Part B. Resources2380-23592021-01-016123623810.1080/23802359.2020.18619961861996Characterization of the complete mitochondrial genome of Ilisha striatula (Clupeiformes, Pristigasteridae) and phylogenetic studies of ClupeiformesJiaqi Fang0Kehua Zhu1Lele Yang2Liqin Liu3Lv Zhengming4National Engineering Laboratory of Marine Germplasm Resources Exploration and Utilization, Zhejiang Ocean UniversityNational Engineering Laboratory of Marine Germplasm Resources Exploration and Utilization, Zhejiang Ocean UniversityNational Engineering Laboratory of Marine Germplasm Resources Exploration and Utilization, Zhejiang Ocean UniversityNational Engineering Laboratory of Marine Germplasm Resources Exploration and Utilization, Zhejiang Ocean UniversityNational Engineering Laboratory of Marine Germplasm Resources Exploration and Utilization, Zhejiang Ocean UniversityIn this study, the complete mitochondrial genome of Ilisha striatula is presented, and we also discussed its mitochondrial characteristics. The full length of the mitochondrial genome was 16,847 bp, including 13 protein-coding genes (PCGs), 2 ribosomal RNAs, 22 transfer RNA genes, one non-coding control region (CR), and one origin of replication on the light-strand. The total nucleotide composition of the mitochondrial genome was 31.11% A, 24.62% T, 29.10% C, 15.16% G, and AT was 55.73%. The phylogenetic tree based on the ML method supported the placement of I. striatula in a close relationship with I. elongata. These data contribute to a better understanding of the systematics of the Pristigasteridae.http://dx.doi.org/10.1080/23802359.2020.1861996ilisha striatulamitochondrial genomephylogenetic analysisclupeiformes |
| spellingShingle | Jiaqi Fang Kehua Zhu Lele Yang Liqin Liu Lv Zhengming Characterization of the complete mitochondrial genome of Ilisha striatula (Clupeiformes, Pristigasteridae) and phylogenetic studies of Clupeiformes Mitochondrial DNA. Part B. Resources ilisha striatula mitochondrial genome phylogenetic analysis clupeiformes |
| title | Characterization of the complete mitochondrial genome of Ilisha striatula (Clupeiformes, Pristigasteridae) and phylogenetic studies of Clupeiformes |
| title_full | Characterization of the complete mitochondrial genome of Ilisha striatula (Clupeiformes, Pristigasteridae) and phylogenetic studies of Clupeiformes |
| title_fullStr | Characterization of the complete mitochondrial genome of Ilisha striatula (Clupeiformes, Pristigasteridae) and phylogenetic studies of Clupeiformes |
| title_full_unstemmed | Characterization of the complete mitochondrial genome of Ilisha striatula (Clupeiformes, Pristigasteridae) and phylogenetic studies of Clupeiformes |
| title_short | Characterization of the complete mitochondrial genome of Ilisha striatula (Clupeiformes, Pristigasteridae) and phylogenetic studies of Clupeiformes |
| title_sort | characterization of the complete mitochondrial genome of ilisha striatula clupeiformes pristigasteridae and phylogenetic studies of clupeiformes |
| topic | ilisha striatula mitochondrial genome phylogenetic analysis clupeiformes |
| url | http://dx.doi.org/10.1080/23802359.2020.1861996 |
| work_keys_str_mv | AT jiaqifang characterizationofthecompletemitochondrialgenomeofilishastriatulaclupeiformespristigasteridaeandphylogeneticstudiesofclupeiformes AT kehuazhu characterizationofthecompletemitochondrialgenomeofilishastriatulaclupeiformespristigasteridaeandphylogeneticstudiesofclupeiformes AT leleyang characterizationofthecompletemitochondrialgenomeofilishastriatulaclupeiformespristigasteridaeandphylogeneticstudiesofclupeiformes AT liqinliu characterizationofthecompletemitochondrialgenomeofilishastriatulaclupeiformespristigasteridaeandphylogeneticstudiesofclupeiformes AT lvzhengming characterizationofthecompletemitochondrialgenomeofilishastriatulaclupeiformespristigasteridaeandphylogeneticstudiesofclupeiformes |