The complete chloroplast genome of Camellia grijsii, an ornamental shrub with floral aroma
Camellia grijsii is an ornamental shrub with a floral aroma, which is widely cultivated and used for landscaping in China. To obtain the genetic information of C. grijsii, we have sequenced and assembled the complete chloroplast (cp) genome based on the Illumina Hiseq platform. The total genome size...
| Main Authors: | , , , , , |
|---|---|
| Format: | Article |
| Language: | English |
| Published: |
Taylor & Francis Group
2021-03-01
|
| Series: | Mitochondrial DNA. Part B. Resources |
| Subjects: | |
| Online Access: | http://dx.doi.org/10.1080/23802359.2021.1875901 |
| _version_ | 1797639004738289664 |
|---|---|
| author | Fengyu Xie Yingkun Sun Xinlei Li Ziyan Nie Hengfu Yin Jiyuan Li |
| author_facet | Fengyu Xie Yingkun Sun Xinlei Li Ziyan Nie Hengfu Yin Jiyuan Li |
| author_sort | Fengyu Xie |
| collection | DOAJ |
| description | Camellia grijsii is an ornamental shrub with a floral aroma, which is widely cultivated and used for landscaping in China. To obtain the genetic information of C. grijsii, we have sequenced and assembled the complete chloroplast (cp) genome based on the Illumina Hiseq platform. The total genome size is 161,078 bp in length with 37.18% GC, which contains a large single copy (LSC, 84,645 bp) region, a small single copy (SSC, 15,772 bp) region, and a pair of inverted repeat (IRs, 30,330 bp) regions. It is composed of 81 protein-coding genes, 4 ribosomal RNAs, and 43 transfer RNAs. The cp genome of C. grijsii has also been compared with other species of Camellia, and the results showed that the C. grijsii and the C. grandbibracteata are closely related. This study provides the complete cp genome of C. grijsii and has an important reference value for the evolutionary analysis. |
| first_indexed | 2024-03-11T13:10:32Z |
| format | Article |
| id | doaj.art-625a4022a31f47dbb8c7e8a8847a1535 |
| institution | Directory Open Access Journal |
| issn | 2380-2359 |
| language | English |
| last_indexed | 2024-03-11T13:10:32Z |
| publishDate | 2021-03-01 |
| publisher | Taylor & Francis Group |
| record_format | Article |
| series | Mitochondrial DNA. Part B. Resources |
| spelling | doaj.art-625a4022a31f47dbb8c7e8a8847a15352023-11-03T14:08:19ZengTaylor & Francis GroupMitochondrial DNA. Part B. Resources2380-23592021-03-016374874910.1080/23802359.2021.18759011875901The complete chloroplast genome of Camellia grijsii, an ornamental shrub with floral aromaFengyu Xie0Yingkun Sun1Xinlei Li2Ziyan Nie3Hengfu Yin4Jiyuan Li5College of Landscape and Forestry, Qingdao Agricultural UniversityCollege of Landscape and Forestry, Qingdao Agricultural UniversityState Key Laboratory of Tree Genetics and Breeding, Research Institute of Subtropical Forestry, Chinese Academy of ForestryState Key Laboratory of Tree Genetics and Breeding, Research Institute of Subtropical Forestry, Chinese Academy of ForestryState Key Laboratory of Tree Genetics and Breeding, Research Institute of Subtropical Forestry, Chinese Academy of ForestryState Key Laboratory of Tree Genetics and Breeding, Research Institute of Subtropical Forestry, Chinese Academy of ForestryCamellia grijsii is an ornamental shrub with a floral aroma, which is widely cultivated and used for landscaping in China. To obtain the genetic information of C. grijsii, we have sequenced and assembled the complete chloroplast (cp) genome based on the Illumina Hiseq platform. The total genome size is 161,078 bp in length with 37.18% GC, which contains a large single copy (LSC, 84,645 bp) region, a small single copy (SSC, 15,772 bp) region, and a pair of inverted repeat (IRs, 30,330 bp) regions. It is composed of 81 protein-coding genes, 4 ribosomal RNAs, and 43 transfer RNAs. The cp genome of C. grijsii has also been compared with other species of Camellia, and the results showed that the C. grijsii and the C. grandbibracteata are closely related. This study provides the complete cp genome of C. grijsii and has an important reference value for the evolutionary analysis.http://dx.doi.org/10.1080/23802359.2021.1875901camellia grijsiichloroplast genomephylogenetic analysis |
| spellingShingle | Fengyu Xie Yingkun Sun Xinlei Li Ziyan Nie Hengfu Yin Jiyuan Li The complete chloroplast genome of Camellia grijsii, an ornamental shrub with floral aroma Mitochondrial DNA. Part B. Resources camellia grijsii chloroplast genome phylogenetic analysis |
| title | The complete chloroplast genome of Camellia grijsii, an ornamental shrub with floral aroma |
| title_full | The complete chloroplast genome of Camellia grijsii, an ornamental shrub with floral aroma |
| title_fullStr | The complete chloroplast genome of Camellia grijsii, an ornamental shrub with floral aroma |
| title_full_unstemmed | The complete chloroplast genome of Camellia grijsii, an ornamental shrub with floral aroma |
| title_short | The complete chloroplast genome of Camellia grijsii, an ornamental shrub with floral aroma |
| title_sort | complete chloroplast genome of camellia grijsii an ornamental shrub with floral aroma |
| topic | camellia grijsii chloroplast genome phylogenetic analysis |
| url | http://dx.doi.org/10.1080/23802359.2021.1875901 |
| work_keys_str_mv | AT fengyuxie thecompletechloroplastgenomeofcamelliagrijsiianornamentalshrubwithfloralaroma AT yingkunsun thecompletechloroplastgenomeofcamelliagrijsiianornamentalshrubwithfloralaroma AT xinleili thecompletechloroplastgenomeofcamelliagrijsiianornamentalshrubwithfloralaroma AT ziyannie thecompletechloroplastgenomeofcamelliagrijsiianornamentalshrubwithfloralaroma AT hengfuyin thecompletechloroplastgenomeofcamelliagrijsiianornamentalshrubwithfloralaroma AT jiyuanli thecompletechloroplastgenomeofcamelliagrijsiianornamentalshrubwithfloralaroma AT fengyuxie completechloroplastgenomeofcamelliagrijsiianornamentalshrubwithfloralaroma AT yingkunsun completechloroplastgenomeofcamelliagrijsiianornamentalshrubwithfloralaroma AT xinleili completechloroplastgenomeofcamelliagrijsiianornamentalshrubwithfloralaroma AT ziyannie completechloroplastgenomeofcamelliagrijsiianornamentalshrubwithfloralaroma AT hengfuyin completechloroplastgenomeofcamelliagrijsiianornamentalshrubwithfloralaroma AT jiyuanli completechloroplastgenomeofcamelliagrijsiianornamentalshrubwithfloralaroma |