Moving from Empirical to Rational Vaccine Design in the ‘Omics’ Era

An ideal vaccine provides long lasting protection against a pathogen by eliciting a well-rounded immune response which engages both innate and adaptive immunity. However, we have a limited understanding of how components of innate immunity, antibody and cell-mediated adaptive immunity interact and f...

Full description

Bibliographic Details
Main Authors: Mansi Sharma, Florian Krammer, Adolfo García-Sastre, Shashank Tripathi
Format: Article
Language:English
Published: MDPI AG 2019-08-01
Series:Vaccines
Subjects:
Online Access:https://www.mdpi.com/2076-393X/7/3/89
_version_ 1828282535480655872
author Mansi Sharma
Florian Krammer
Adolfo García-Sastre
Shashank Tripathi
author_facet Mansi Sharma
Florian Krammer
Adolfo García-Sastre
Shashank Tripathi
author_sort Mansi Sharma
collection DOAJ
description An ideal vaccine provides long lasting protection against a pathogen by eliciting a well-rounded immune response which engages both innate and adaptive immunity. However, we have a limited understanding of how components of innate immunity, antibody and cell-mediated adaptive immunity interact and function together at a systems level. With advances in high-throughput ‘Omics’ methodologies it has become possible to capture global changes in the host, at a cellular and molecular level, that are induced by vaccination and infection. Analysis of these datasets has shown the promise of discovering mechanisms behind vaccine mediated protection, immunological memory, adverse effects as well as development of more efficient antigens and adjuvants. In this review, we will discuss how systems vaccinology takes advantage of new technology platforms and big data analysis, to enable the rational development of better vaccines.
first_indexed 2024-04-13T08:31:08Z
format Article
id doaj.art-62f5ccdf4d4e4af0a13298ea3fc62618
institution Directory Open Access Journal
issn 2076-393X
language English
last_indexed 2024-04-13T08:31:08Z
publishDate 2019-08-01
publisher MDPI AG
record_format Article
series Vaccines
spelling doaj.art-62f5ccdf4d4e4af0a13298ea3fc626182022-12-22T02:54:15ZengMDPI AGVaccines2076-393X2019-08-01738910.3390/vaccines7030089vaccines7030089Moving from Empirical to Rational Vaccine Design in the ‘Omics’ EraMansi Sharma0Florian Krammer1Adolfo García-Sastre2Shashank Tripathi3Department of Microbiology & Cell Biology, Indian Institute of Science, Bengaluru 560012, IndiaDepartment of Microbiology, Icahn School of Medicine at Mount Sinai, New York, NY 10029, USADepartment of Microbiology, Icahn School of Medicine at Mount Sinai, New York, NY 10029, USADepartment of Microbiology & Cell Biology, Indian Institute of Science, Bengaluru 560012, IndiaAn ideal vaccine provides long lasting protection against a pathogen by eliciting a well-rounded immune response which engages both innate and adaptive immunity. However, we have a limited understanding of how components of innate immunity, antibody and cell-mediated adaptive immunity interact and function together at a systems level. With advances in high-throughput ‘Omics’ methodologies it has become possible to capture global changes in the host, at a cellular and molecular level, that are induced by vaccination and infection. Analysis of these datasets has shown the promise of discovering mechanisms behind vaccine mediated protection, immunological memory, adverse effects as well as development of more efficient antigens and adjuvants. In this review, we will discuss how systems vaccinology takes advantage of new technology platforms and big data analysis, to enable the rational development of better vaccines.https://www.mdpi.com/2076-393X/7/3/89omicssystems biologysystems vaccinologyvaccinesignaturebiomarkersimmunogenicityprotectionadjuvantantigenmicrobiome
spellingShingle Mansi Sharma
Florian Krammer
Adolfo García-Sastre
Shashank Tripathi
Moving from Empirical to Rational Vaccine Design in the ‘Omics’ Era
Vaccines
omics
systems biology
systems vaccinology
vaccine
signature
biomarkers
immunogenicity
protection
adjuvant
antigen
microbiome
title Moving from Empirical to Rational Vaccine Design in the ‘Omics’ Era
title_full Moving from Empirical to Rational Vaccine Design in the ‘Omics’ Era
title_fullStr Moving from Empirical to Rational Vaccine Design in the ‘Omics’ Era
title_full_unstemmed Moving from Empirical to Rational Vaccine Design in the ‘Omics’ Era
title_short Moving from Empirical to Rational Vaccine Design in the ‘Omics’ Era
title_sort moving from empirical to rational vaccine design in the omics era
topic omics
systems biology
systems vaccinology
vaccine
signature
biomarkers
immunogenicity
protection
adjuvant
antigen
microbiome
url https://www.mdpi.com/2076-393X/7/3/89
work_keys_str_mv AT mansisharma movingfromempiricaltorationalvaccinedesignintheomicsera
AT floriankrammer movingfromempiricaltorationalvaccinedesignintheomicsera
AT adolfogarciasastre movingfromempiricaltorationalvaccinedesignintheomicsera
AT shashanktripathi movingfromempiricaltorationalvaccinedesignintheomicsera