The complete chloroplast genome sequence of Crassocephalum crepidioides (Benth.) S. Moore. (Asteraceae)
The complete chloroplast (cp) genome of Crassocephalum crepidioides was sequenced and assembled for the first time. In this study, the total genome size is 150,596 bp in length and demonstrates a typical quadripartite structure containing a large single copy (LSC, 82,575 bp) and a small single copy...
| Main Authors: | , , , , , |
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| Format: | Article |
| Language: | English |
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Taylor & Francis Group
2021-07-01
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| Series: | Mitochondrial DNA. Part B. Resources |
| Subjects: | |
| Online Access: | http://dx.doi.org/10.1080/23802359.2021.1934165 |
| _version_ | 1827772440576524288 |
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| author | Song Wei-Cai Liu Xiao-Fan Shuo Wang Zhang Rui-Qing Shi Chao Yun-Jiao Zhang |
| author_facet | Song Wei-Cai Liu Xiao-Fan Shuo Wang Zhang Rui-Qing Shi Chao Yun-Jiao Zhang |
| author_sort | Song Wei-Cai |
| collection | DOAJ |
| description | The complete chloroplast (cp) genome of Crassocephalum crepidioides was sequenced and assembled for the first time. In this study, the total genome size is 150,596 bp in length and demonstrates a typical quadripartite structure containing a large single copy (LSC, 82,575 bp) and a small single copy (SSC, 18,293 bp), separated by a pair of inverted repeats (IRa, IRb) of 24,864 bp. The G + C content of this cp genome was 37.21%. Gene annotation analysis identified 130 genes including 85 protein-coding genes, 37 transfer RNA, and 8 ribosomal RNA genes. The maximum-likelihood phylogenetic analysis result showed that C. crepidioides was closely related to Nannoglottis ravida in the phylogenetic relationship. |
| first_indexed | 2024-03-11T13:08:34Z |
| format | Article |
| id | doaj.art-637e489302e540c5830e4de998e79a0b |
| institution | Directory Open Access Journal |
| issn | 2380-2359 |
| language | English |
| last_indexed | 2024-03-11T13:08:34Z |
| publishDate | 2021-07-01 |
| publisher | Taylor & Francis Group |
| record_format | Article |
| series | Mitochondrial DNA. Part B. Resources |
| spelling | doaj.art-637e489302e540c5830e4de998e79a0b2023-11-03T14:16:11ZengTaylor & Francis GroupMitochondrial DNA. Part B. Resources2380-23592021-07-01671834183610.1080/23802359.2021.19341651934165The complete chloroplast genome sequence of Crassocephalum crepidioides (Benth.) S. Moore. (Asteraceae)Song Wei-Cai0Liu Xiao-Fan1Shuo Wang2Zhang Rui-Qing3Shi Chao4Yun-Jiao Zhang5College of Marine Science and Biological Engineering, Qingdao University of Science and TechnologyCollege of Marine Science and Biological Engineering, Qingdao University of Science and TechnologyCollege of Marine Science and Biological Engineering, Qingdao University of Science and TechnologyCollege of Marine Science and Biological Engineering, Qingdao University of Science and TechnologyCollege of Marine Science and Biological Engineering, Qingdao University of Science and TechnologyKunming Medical University Haiyuan CollegeThe complete chloroplast (cp) genome of Crassocephalum crepidioides was sequenced and assembled for the first time. In this study, the total genome size is 150,596 bp in length and demonstrates a typical quadripartite structure containing a large single copy (LSC, 82,575 bp) and a small single copy (SSC, 18,293 bp), separated by a pair of inverted repeats (IRa, IRb) of 24,864 bp. The G + C content of this cp genome was 37.21%. Gene annotation analysis identified 130 genes including 85 protein-coding genes, 37 transfer RNA, and 8 ribosomal RNA genes. The maximum-likelihood phylogenetic analysis result showed that C. crepidioides was closely related to Nannoglottis ravida in the phylogenetic relationship.http://dx.doi.org/10.1080/23802359.2021.1934165asteraceaecrassocephalum crepidioideschloroplast genomephylogenetic relationship |
| spellingShingle | Song Wei-Cai Liu Xiao-Fan Shuo Wang Zhang Rui-Qing Shi Chao Yun-Jiao Zhang The complete chloroplast genome sequence of Crassocephalum crepidioides (Benth.) S. Moore. (Asteraceae) Mitochondrial DNA. Part B. Resources asteraceae crassocephalum crepidioides chloroplast genome phylogenetic relationship |
| title | The complete chloroplast genome sequence of Crassocephalum crepidioides (Benth.) S. Moore. (Asteraceae) |
| title_full | The complete chloroplast genome sequence of Crassocephalum crepidioides (Benth.) S. Moore. (Asteraceae) |
| title_fullStr | The complete chloroplast genome sequence of Crassocephalum crepidioides (Benth.) S. Moore. (Asteraceae) |
| title_full_unstemmed | The complete chloroplast genome sequence of Crassocephalum crepidioides (Benth.) S. Moore. (Asteraceae) |
| title_short | The complete chloroplast genome sequence of Crassocephalum crepidioides (Benth.) S. Moore. (Asteraceae) |
| title_sort | complete chloroplast genome sequence of crassocephalum crepidioides benth s moore asteraceae |
| topic | asteraceae crassocephalum crepidioides chloroplast genome phylogenetic relationship |
| url | http://dx.doi.org/10.1080/23802359.2021.1934165 |
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