Crystallization and Crystallographic Analysis of a <i>Bradyrhizobium Elkanii</i> USDA94 Haloalkane Dehalogenase Variant with an Eliminated Halide-Binding Site

Haloalkane dehalogenases are a very important class of microbial enzymes for environmental detoxification of halogenated pollutants, for biocatalysis, biosensing and molecular tagging. The double mutant (Ile44Leu + Gln102His) of the haloalkane dehalogenase DbeA from <i>Bradyrhizobium elkanii&l...

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Main Authors: Tatyana Prudnikova, Barbora Kascakova, Jeroen R. Mesters, Pavel Grinkevich, Petra Havlickova, Andrii Mazur, Anastasiia Shaposhnikova, Radka Chaloupkova, Jiri Damborsky, Michal Kuty, Ivana Kuta Smatanova
Format: Article
Language:English
Published: MDPI AG 2019-07-01
Series:Crystals
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Online Access:https://www.mdpi.com/2073-4352/9/7/375
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Summary:Haloalkane dehalogenases are a very important class of microbial enzymes for environmental detoxification of halogenated pollutants, for biocatalysis, biosensing and molecular tagging. The double mutant (Ile44Leu + Gln102His) of the haloalkane dehalogenase DbeA from <i>Bradyrhizobium elkanii</i> USDA94 (DbeA&#916;Cl) was constructed to study the role of the second halide-binding site previously discovered in the wild-type structure. The variant is less active, less stable in the presence of chloride ions and exhibits significantly altered substrate specificity when compared with the DbeAwt. DbeA&#916;Cl was crystallized using the sitting-drop vapour-diffusion procedure with further optimization by the random microseeding technique. The crystal structure of the DbeA&#916;Cl has been determined and refined to the 1.4 &#197; resolution. The DbeA&#916;Cl crystals belong to monoclinic space group <i>C</i>121. The DbeA&#916;Cl molecular structure was characterized and compared with five known haloalkane dehalogenases selected from the Protein Data Bank.
ISSN:2073-4352