Drivers of respiratory syncytial virus seasonal epidemics in children under 5 years in Kilifi, coastal Kenya

Respiratory syncytial virus (RSV) causes significant childhood morbidity and mortality in the developing world. The determinants of RSV seasonality are of importance in designing interventions. They are poorly understood in tropical and sub-tropical regions in low- and middle-income countries. Our s...

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Main Authors: James Wambua, Patrick K. Munywoki, Pietro Coletti, Bryan O. Nyawanda, Nickson Murunga, D. James Nokes, Niel Hens
Format: Article
Language:English
Published: Public Library of Science (PLoS) 2022-01-01
Series:PLoS ONE
Online Access:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9704647/?tool=EBI
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author James Wambua
Patrick K. Munywoki
Pietro Coletti
Bryan O. Nyawanda
Nickson Murunga
D. James Nokes
Niel Hens
author_facet James Wambua
Patrick K. Munywoki
Pietro Coletti
Bryan O. Nyawanda
Nickson Murunga
D. James Nokes
Niel Hens
author_sort James Wambua
collection DOAJ
description Respiratory syncytial virus (RSV) causes significant childhood morbidity and mortality in the developing world. The determinants of RSV seasonality are of importance in designing interventions. They are poorly understood in tropical and sub-tropical regions in low- and middle-income countries. Our study utilized long-term surveillance data on cases of RSV associated with severe or very severe pneumonia in children aged 1 day to 59 months admitted to the Kilifi County Hospital. A generalized additive model was used to investigate the association between RSV admissions and meteorological variables (maximum temperature, rainfall, absolute humidity); weekly number of births within the catchment population; and school term dates. Furthermore, a time-series-susceptible-infected-recovered (TSIR) model was used to reconstruct an empirical transmission rate which was used as a dependent variable in linear regression and generalized additive models with meteorological variables and school term dates. Maximum temperature, absolute humidity, and weekly number of births were significantly associated with RSV activity in the generalized additive model. Results from the TSIR model indicated that maximum temperature and absolute humidity were significant factors. Rainfall and school term did not yield significant relationships. Our study indicates that meteorological parameters and weekly number of births potentially play a role in the RSV seasonality in this region. More research is required to explore the underlying mechanisms underpinning the observed relationships.
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spelling doaj.art-660bbe918ba1490b9c46de903f4611942022-12-22T02:48:28ZengPublic Library of Science (PLoS)PLoS ONE1932-62032022-01-011711Drivers of respiratory syncytial virus seasonal epidemics in children under 5 years in Kilifi, coastal KenyaJames WambuaPatrick K. MunywokiPietro ColettiBryan O. NyawandaNickson MurungaD. James NokesNiel HensRespiratory syncytial virus (RSV) causes significant childhood morbidity and mortality in the developing world. The determinants of RSV seasonality are of importance in designing interventions. They are poorly understood in tropical and sub-tropical regions in low- and middle-income countries. Our study utilized long-term surveillance data on cases of RSV associated with severe or very severe pneumonia in children aged 1 day to 59 months admitted to the Kilifi County Hospital. A generalized additive model was used to investigate the association between RSV admissions and meteorological variables (maximum temperature, rainfall, absolute humidity); weekly number of births within the catchment population; and school term dates. Furthermore, a time-series-susceptible-infected-recovered (TSIR) model was used to reconstruct an empirical transmission rate which was used as a dependent variable in linear regression and generalized additive models with meteorological variables and school term dates. Maximum temperature, absolute humidity, and weekly number of births were significantly associated with RSV activity in the generalized additive model. Results from the TSIR model indicated that maximum temperature and absolute humidity were significant factors. Rainfall and school term did not yield significant relationships. Our study indicates that meteorological parameters and weekly number of births potentially play a role in the RSV seasonality in this region. More research is required to explore the underlying mechanisms underpinning the observed relationships.https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9704647/?tool=EBI
spellingShingle James Wambua
Patrick K. Munywoki
Pietro Coletti
Bryan O. Nyawanda
Nickson Murunga
D. James Nokes
Niel Hens
Drivers of respiratory syncytial virus seasonal epidemics in children under 5 years in Kilifi, coastal Kenya
PLoS ONE
title Drivers of respiratory syncytial virus seasonal epidemics in children under 5 years in Kilifi, coastal Kenya
title_full Drivers of respiratory syncytial virus seasonal epidemics in children under 5 years in Kilifi, coastal Kenya
title_fullStr Drivers of respiratory syncytial virus seasonal epidemics in children under 5 years in Kilifi, coastal Kenya
title_full_unstemmed Drivers of respiratory syncytial virus seasonal epidemics in children under 5 years in Kilifi, coastal Kenya
title_short Drivers of respiratory syncytial virus seasonal epidemics in children under 5 years in Kilifi, coastal Kenya
title_sort drivers of respiratory syncytial virus seasonal epidemics in children under 5 years in kilifi coastal kenya
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9704647/?tool=EBI
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