The complete chloroplast genome sequence of Actinidia styracifolia C. F. Liang
The complete chloroplast (cp) genome sequence of Actinidia styracifolia C. F. Liang was assembled using Illumina pair-end sequencing data in this study. The assembled plastome was 156,845 bp in length, including a large single copy (LSC) region of 88,624 bp and a small single copy (SSC) region of 20...
| Main Authors: | , , , , , , |
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| Format: | Article |
| Language: | English |
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Taylor & Francis Group
2020-01-01
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| Series: | Mitochondrial DNA. Part B. Resources |
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| Online Access: | http://dx.doi.org/10.1080/23802359.2019.1698337 |
| _version_ | 1797639496541405184 |
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| author | Aihong Yang Shujuan Liu Tengyun Liu Miao Hu Yongda Zhong Lipan Liu Faxin Yu |
| author_facet | Aihong Yang Shujuan Liu Tengyun Liu Miao Hu Yongda Zhong Lipan Liu Faxin Yu |
| author_sort | Aihong Yang |
| collection | DOAJ |
| description | The complete chloroplast (cp) genome sequence of Actinidia styracifolia C. F. Liang was assembled using Illumina pair-end sequencing data in this study. The assembled plastome was 156,845 bp in length, including a large single copy (LSC) region of 88,624 bp and a small single copy (SSC) region of 20,535bp, which were separated by two inverted repeat (IR) regions of 23,843 bp. The plastome contains 113 different genes, consisting of 79 unique protein-coding genes, 30 tRNA genes, and 4 rRNA genes. Phylogenetic analysis based on chloroplast genomes revealed that A. styracifolia has a close genetic relationship with A. eriantha. |
| first_indexed | 2024-03-11T13:18:36Z |
| format | Article |
| id | doaj.art-66823b38af184b109528ae23f095973b |
| institution | Directory Open Access Journal |
| issn | 2380-2359 |
| language | English |
| last_indexed | 2024-03-11T13:18:36Z |
| publishDate | 2020-01-01 |
| publisher | Taylor & Francis Group |
| record_format | Article |
| series | Mitochondrial DNA. Part B. Resources |
| spelling | doaj.art-66823b38af184b109528ae23f095973b2023-11-03T10:38:53ZengTaylor & Francis GroupMitochondrial DNA. Part B. Resources2380-23592020-01-0151909110.1080/23802359.2019.16983371698337The complete chloroplast genome sequence of Actinidia styracifolia C. F. LiangAihong Yang0Shujuan Liu1Tengyun Liu2Miao Hu3Yongda Zhong4Lipan Liu5Faxin Yu6The Key Laboratory of Horticultural Plant Genetic and Improvement of Jiangxi, Institute of Biological Resources, Jiangxi Academy of SciencesThe Key Laboratory of Horticultural Plant Genetic and Improvement of Jiangxi, Institute of Biological Resources, Jiangxi Academy of SciencesThe Key Laboratory of Horticultural Plant Genetic and Improvement of Jiangxi, Institute of Biological Resources, Jiangxi Academy of SciencesThe Key Laboratory of Horticultural Plant Genetic and Improvement of Jiangxi, Institute of Biological Resources, Jiangxi Academy of SciencesThe Key Laboratory of Horticultural Plant Genetic and Improvement of Jiangxi, Institute of Biological Resources, Jiangxi Academy of SciencesThe Key Laboratory of Horticultural Plant Genetic and Improvement of Jiangxi, Institute of Biological Resources, Jiangxi Academy of SciencesThe Key Laboratory of Horticultural Plant Genetic and Improvement of Jiangxi, Institute of Biological Resources, Jiangxi Academy of SciencesThe complete chloroplast (cp) genome sequence of Actinidia styracifolia C. F. Liang was assembled using Illumina pair-end sequencing data in this study. The assembled plastome was 156,845 bp in length, including a large single copy (LSC) region of 88,624 bp and a small single copy (SSC) region of 20,535bp, which were separated by two inverted repeat (IR) regions of 23,843 bp. The plastome contains 113 different genes, consisting of 79 unique protein-coding genes, 30 tRNA genes, and 4 rRNA genes. Phylogenetic analysis based on chloroplast genomes revealed that A. styracifolia has a close genetic relationship with A. eriantha.http://dx.doi.org/10.1080/23802359.2019.1698337actinidia styracifoliacomplete chloroplast genomephylogenetic analysis |
| spellingShingle | Aihong Yang Shujuan Liu Tengyun Liu Miao Hu Yongda Zhong Lipan Liu Faxin Yu The complete chloroplast genome sequence of Actinidia styracifolia C. F. Liang Mitochondrial DNA. Part B. Resources actinidia styracifolia complete chloroplast genome phylogenetic analysis |
| title | The complete chloroplast genome sequence of Actinidia styracifolia C. F. Liang |
| title_full | The complete chloroplast genome sequence of Actinidia styracifolia C. F. Liang |
| title_fullStr | The complete chloroplast genome sequence of Actinidia styracifolia C. F. Liang |
| title_full_unstemmed | The complete chloroplast genome sequence of Actinidia styracifolia C. F. Liang |
| title_short | The complete chloroplast genome sequence of Actinidia styracifolia C. F. Liang |
| title_sort | complete chloroplast genome sequence of actinidia styracifolia c f liang |
| topic | actinidia styracifolia complete chloroplast genome phylogenetic analysis |
| url | http://dx.doi.org/10.1080/23802359.2019.1698337 |
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