Suppression of Rice Osa-miR444.2 Improves the Resistance to Sheath Blight in Rice Mediating through the Phytohormone Pathway

MicroRNAs (miRNAs) are a class of conserved small RNA with a length of 21–24 nucleotides in eukaryotes, which are involved in development and defense responses against biotic and abiotic stresses. By RNA-seq, Osa-miR444b.2 was identified to be induced after <i>Rhizoctonia solani</i> (<...

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Main Authors: Tao Feng, Zhao-Yang Zhang, Peng Gao, Zhi-Ming Feng, Shi-Min Zuo, Shou-Qiang Ouyang
Format: Article
Language:English
Published: MDPI AG 2023-02-01
Series:International Journal of Molecular Sciences
Subjects:
Online Access:https://www.mdpi.com/1422-0067/24/4/3653
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author Tao Feng
Zhao-Yang Zhang
Peng Gao
Zhi-Ming Feng
Shi-Min Zuo
Shou-Qiang Ouyang
author_facet Tao Feng
Zhao-Yang Zhang
Peng Gao
Zhi-Ming Feng
Shi-Min Zuo
Shou-Qiang Ouyang
author_sort Tao Feng
collection DOAJ
description MicroRNAs (miRNAs) are a class of conserved small RNA with a length of 21–24 nucleotides in eukaryotes, which are involved in development and defense responses against biotic and abiotic stresses. By RNA-seq, Osa-miR444b.2 was identified to be induced after <i>Rhizoctonia solani</i> (<i>R. solani</i>) infection. In order to clarify the function of Osa-miR444b.2 responding to <i>R. solani</i> infection in rice, transgenic lines over-expressing and knocking out Osa-miR444b.2 were generated in the background of susceptible cultivar Xu3 and resistant cultivar YSBR1, respectively. Over-expressing Osa-miR444b.2 resulted in compromised resistance to <i>R. solani</i>. In contrast, the knocking out Osa-miR444b.2 lines exhibited improved resistance to <i>R. solani</i>. Furthermore, knocking out Osa-miR444b.2 resulted in increased height, tillers, smaller panicle, and decreased 1000-grain weight and primary branches. However, the transgenic lines over-expressing Osa-miR444b.2 showed decreased primary branches and tillers, but increased panicle length. These results indicated that Osa-miR444b.2 was also involved in regulating the agronomic traits in rice. The RNA-seq assay revealed that Osa-miR444b.2 mainly regulated the resistance to rice sheath blight disease by affecting the expression of plant hormone signaling pathways-related genes such as ET and IAA, and transcription factors such as WRKYs and F-boxes. Together, our results suggest that Osa-miR444b.2 negatively mediated the resistance to <i>R. solani</i> in rice, which will contribute to the cultivation of sheath blight resistant varieties.
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spelling doaj.art-684a0830b7cc40f986b3455c74f9e7862023-11-16T21:03:10ZengMDPI AGInternational Journal of Molecular Sciences1661-65961422-00672023-02-01244365310.3390/ijms24043653Suppression of Rice Osa-miR444.2 Improves the Resistance to Sheath Blight in Rice Mediating through the Phytohormone PathwayTao Feng0Zhao-Yang Zhang1Peng Gao2Zhi-Ming Feng3Shi-Min Zuo4Shou-Qiang Ouyang5College of Horticulture and Plant Protection, Yangzhou University, Yangzhou 225009, ChinaCollege of Horticulture and Plant Protection, Yangzhou University, Yangzhou 225009, ChinaKey Laboratory of Plant Functional Genomics of the Ministry of Education/Jiangsu Key Laboratory of Crop Genomics and Molecular Breeding, Agricultural College, Yangzhou University, Yangzhou 225009, ChinaKey Laboratory of Plant Functional Genomics of the Ministry of Education/Jiangsu Key Laboratory of Crop Genomics and Molecular Breeding, Agricultural College, Yangzhou University, Yangzhou 225009, ChinaKey Laboratory of Plant Functional Genomics of the Ministry of Education/Jiangsu Key Laboratory of Crop Genomics and Molecular Breeding, Agricultural College, Yangzhou University, Yangzhou 225009, ChinaCollege of Horticulture and Plant Protection, Yangzhou University, Yangzhou 225009, ChinaMicroRNAs (miRNAs) are a class of conserved small RNA with a length of 21–24 nucleotides in eukaryotes, which are involved in development and defense responses against biotic and abiotic stresses. By RNA-seq, Osa-miR444b.2 was identified to be induced after <i>Rhizoctonia solani</i> (<i>R. solani</i>) infection. In order to clarify the function of Osa-miR444b.2 responding to <i>R. solani</i> infection in rice, transgenic lines over-expressing and knocking out Osa-miR444b.2 were generated in the background of susceptible cultivar Xu3 and resistant cultivar YSBR1, respectively. Over-expressing Osa-miR444b.2 resulted in compromised resistance to <i>R. solani</i>. In contrast, the knocking out Osa-miR444b.2 lines exhibited improved resistance to <i>R. solani</i>. Furthermore, knocking out Osa-miR444b.2 resulted in increased height, tillers, smaller panicle, and decreased 1000-grain weight and primary branches. However, the transgenic lines over-expressing Osa-miR444b.2 showed decreased primary branches and tillers, but increased panicle length. These results indicated that Osa-miR444b.2 was also involved in regulating the agronomic traits in rice. The RNA-seq assay revealed that Osa-miR444b.2 mainly regulated the resistance to rice sheath blight disease by affecting the expression of plant hormone signaling pathways-related genes such as ET and IAA, and transcription factors such as WRKYs and F-boxes. Together, our results suggest that Osa-miR444b.2 negatively mediated the resistance to <i>R. solani</i> in rice, which will contribute to the cultivation of sheath blight resistant varieties.https://www.mdpi.com/1422-0067/24/4/3653ricemicroRNAsheath blight diseaseresistanceplant hormones
spellingShingle Tao Feng
Zhao-Yang Zhang
Peng Gao
Zhi-Ming Feng
Shi-Min Zuo
Shou-Qiang Ouyang
Suppression of Rice Osa-miR444.2 Improves the Resistance to Sheath Blight in Rice Mediating through the Phytohormone Pathway
International Journal of Molecular Sciences
rice
microRNA
sheath blight disease
resistance
plant hormones
title Suppression of Rice Osa-miR444.2 Improves the Resistance to Sheath Blight in Rice Mediating through the Phytohormone Pathway
title_full Suppression of Rice Osa-miR444.2 Improves the Resistance to Sheath Blight in Rice Mediating through the Phytohormone Pathway
title_fullStr Suppression of Rice Osa-miR444.2 Improves the Resistance to Sheath Blight in Rice Mediating through the Phytohormone Pathway
title_full_unstemmed Suppression of Rice Osa-miR444.2 Improves the Resistance to Sheath Blight in Rice Mediating through the Phytohormone Pathway
title_short Suppression of Rice Osa-miR444.2 Improves the Resistance to Sheath Blight in Rice Mediating through the Phytohormone Pathway
title_sort suppression of rice osa mir444 2 improves the resistance to sheath blight in rice mediating through the phytohormone pathway
topic rice
microRNA
sheath blight disease
resistance
plant hormones
url https://www.mdpi.com/1422-0067/24/4/3653
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