Clonal barcoding with qPCR detection enables live cell functional analyses for cancer research

DNA barcoding methods for the analysis of clonal heterogeneity in cancer have been limited in terms of throughput and practical requirements. Here, the authors develop SunCatcher, a rapid and sensitive barcoding approach for live single-cell clonal evolution analysis, and use this method to study br...

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Main Authors: Qiuchen Guo, Milos Spasic, Adam G. Maynard, Gregory J. Goreczny, Amanuel Bizuayehu, Jessica F. Olive, Peter van Galen, Sandra S. McAllister
Format: Article
Language:English
Published: Nature Portfolio 2022-07-01
Series:Nature Communications
Online Access:https://doi.org/10.1038/s41467-022-31536-5
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author Qiuchen Guo
Milos Spasic
Adam G. Maynard
Gregory J. Goreczny
Amanuel Bizuayehu
Jessica F. Olive
Peter van Galen
Sandra S. McAllister
author_facet Qiuchen Guo
Milos Spasic
Adam G. Maynard
Gregory J. Goreczny
Amanuel Bizuayehu
Jessica F. Olive
Peter van Galen
Sandra S. McAllister
author_sort Qiuchen Guo
collection DOAJ
description DNA barcoding methods for the analysis of clonal heterogeneity in cancer have been limited in terms of throughput and practical requirements. Here, the authors develop SunCatcher, a rapid and sensitive barcoding approach for live single-cell clonal evolution analysis, and use this method to study breast cancer cell populations.
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spelling doaj.art-68595d6af5874896ae6bf1963f2947932022-12-22T01:00:06ZengNature PortfolioNature Communications2041-17232022-07-0113111510.1038/s41467-022-31536-5Clonal barcoding with qPCR detection enables live cell functional analyses for cancer researchQiuchen Guo0Milos Spasic1Adam G. Maynard2Gregory J. Goreczny3Amanuel Bizuayehu4Jessica F. Olive5Peter van Galen6Sandra S. McAllister7Division of Hematology, Department of Medicine, Brigham and Women’s HospitalDivision of Hematology, Department of Medicine, Brigham and Women’s HospitalDepartment of Medicine, Harvard Medical SchoolDivision of Hematology, Department of Medicine, Brigham and Women’s HospitalDivision of Hematology, Department of Medicine, Brigham and Women’s HospitalDivision of Hematology, Department of Medicine, Brigham and Women’s HospitalDivision of Hematology, Department of Medicine, Brigham and Women’s HospitalDivision of Hematology, Department of Medicine, Brigham and Women’s HospitalDNA barcoding methods for the analysis of clonal heterogeneity in cancer have been limited in terms of throughput and practical requirements. Here, the authors develop SunCatcher, a rapid and sensitive barcoding approach for live single-cell clonal evolution analysis, and use this method to study breast cancer cell populations.https://doi.org/10.1038/s41467-022-31536-5
spellingShingle Qiuchen Guo
Milos Spasic
Adam G. Maynard
Gregory J. Goreczny
Amanuel Bizuayehu
Jessica F. Olive
Peter van Galen
Sandra S. McAllister
Clonal barcoding with qPCR detection enables live cell functional analyses for cancer research
Nature Communications
title Clonal barcoding with qPCR detection enables live cell functional analyses for cancer research
title_full Clonal barcoding with qPCR detection enables live cell functional analyses for cancer research
title_fullStr Clonal barcoding with qPCR detection enables live cell functional analyses for cancer research
title_full_unstemmed Clonal barcoding with qPCR detection enables live cell functional analyses for cancer research
title_short Clonal barcoding with qPCR detection enables live cell functional analyses for cancer research
title_sort clonal barcoding with qpcr detection enables live cell functional analyses for cancer research
url https://doi.org/10.1038/s41467-022-31536-5
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