Draft genome sequence of a human-associated isolate of Haloferax alexandrinus strain Arc-hr, an extremely halophilic archaea
We report the draft genome sequence of Haloferax alexandrinus strain Arc-hr (CSUR P798), isolated from the human gut of a 10-year-old Amazonian individual. Its 3 893 626 bp genome exhibits a 66.00% GC content. The genome of the strain Arc-hr contains 37 genes identified as ORFans, seven genes associ...
| Main Authors: | , , , |
|---|---|
| Format: | Article |
| Language: | English |
| Published: |
Elsevier
2017-01-01
|
| Series: | New Microbes and New Infections |
| Subjects: | |
| Online Access: | http://www.sciencedirect.com/science/article/pii/S205229751630124X |
| _version_ | 1811339320773050368 |
|---|---|
| author | S. Khelaifia A. Caputo F. Djossou D. Raoult |
| author_facet | S. Khelaifia A. Caputo F. Djossou D. Raoult |
| author_sort | S. Khelaifia |
| collection | DOAJ |
| description | We report the draft genome sequence of Haloferax alexandrinus strain Arc-hr (CSUR P798), isolated from the human gut of a 10-year-old Amazonian individual. Its 3 893 626 bp genome exhibits a 66.00% GC content. The genome of the strain Arc-hr contains 37 genes identified as ORFans, seven genes associated to halocin and 11 genes associated with polyketide synthases or nonribosomal peptide synthetases. |
| first_indexed | 2024-04-13T18:24:38Z |
| format | Article |
| id | doaj.art-6a476ffd3c744a16a9f736837a7e4888 |
| institution | Directory Open Access Journal |
| issn | 2052-2975 |
| language | English |
| last_indexed | 2024-04-13T18:24:38Z |
| publishDate | 2017-01-01 |
| publisher | Elsevier |
| record_format | Article |
| series | New Microbes and New Infections |
| spelling | doaj.art-6a476ffd3c744a16a9f736837a7e48882022-12-22T02:35:17ZengElsevierNew Microbes and New Infections2052-29752017-01-0115C444510.1016/j.nmni.2016.11.012Draft genome sequence of a human-associated isolate of Haloferax alexandrinus strain Arc-hr, an extremely halophilic archaeaS. Khelaifia0A. Caputo1F. Djossou2D. Raoult3Unité de Recherche sur les Maladies Infectieuses et Tropicales Emergentes, CNRS (UMR 7278), IRD (198), INSERM (U1095), AMU (UM63), Marseille, FranceUnité de Recherche sur les Maladies Infectieuses et Tropicales Emergentes, CNRS (UMR 7278), IRD (198), INSERM (U1095), AMU (UM63), Marseille, FranceInfectious and Tropical Diseases Department, Centre Hospitalier Andrée-Rosemon, Cayenne, French GuianaUnité de Recherche sur les Maladies Infectieuses et Tropicales Emergentes, CNRS (UMR 7278), IRD (198), INSERM (U1095), AMU (UM63), Marseille, FranceWe report the draft genome sequence of Haloferax alexandrinus strain Arc-hr (CSUR P798), isolated from the human gut of a 10-year-old Amazonian individual. Its 3 893 626 bp genome exhibits a 66.00% GC content. The genome of the strain Arc-hr contains 37 genes identified as ORFans, seven genes associated to halocin and 11 genes associated with polyketide synthases or nonribosomal peptide synthetases.http://www.sciencedirect.com/science/article/pii/S205229751630124XCulturomicsgenome sequencegenomicsHaloferax alexandrinushalophilic archaea |
| spellingShingle | S. Khelaifia A. Caputo F. Djossou D. Raoult Draft genome sequence of a human-associated isolate of Haloferax alexandrinus strain Arc-hr, an extremely halophilic archaea New Microbes and New Infections Culturomics genome sequence genomics Haloferax alexandrinus halophilic archaea |
| title | Draft genome sequence of a human-associated isolate of Haloferax alexandrinus strain Arc-hr, an extremely halophilic archaea |
| title_full | Draft genome sequence of a human-associated isolate of Haloferax alexandrinus strain Arc-hr, an extremely halophilic archaea |
| title_fullStr | Draft genome sequence of a human-associated isolate of Haloferax alexandrinus strain Arc-hr, an extremely halophilic archaea |
| title_full_unstemmed | Draft genome sequence of a human-associated isolate of Haloferax alexandrinus strain Arc-hr, an extremely halophilic archaea |
| title_short | Draft genome sequence of a human-associated isolate of Haloferax alexandrinus strain Arc-hr, an extremely halophilic archaea |
| title_sort | draft genome sequence of a human associated isolate of haloferax alexandrinus strain arc hr an extremely halophilic archaea |
| topic | Culturomics genome sequence genomics Haloferax alexandrinus halophilic archaea |
| url | http://www.sciencedirect.com/science/article/pii/S205229751630124X |
| work_keys_str_mv | AT skhelaifia draftgenomesequenceofahumanassociatedisolateofhaloferaxalexandrinusstrainarchranextremelyhalophilicarchaea AT acaputo draftgenomesequenceofahumanassociatedisolateofhaloferaxalexandrinusstrainarchranextremelyhalophilicarchaea AT fdjossou draftgenomesequenceofahumanassociatedisolateofhaloferaxalexandrinusstrainarchranextremelyhalophilicarchaea AT draoult draftgenomesequenceofahumanassociatedisolateofhaloferaxalexandrinusstrainarchranextremelyhalophilicarchaea |