BC-store: A program for MGISEQ barcode sets analysis.
Here we present the devised BC-store-a program for analyzing and selecting sets of barcodes for sequencing on platforms manufactured by MGI Tech (China). The app is available as an open source in Python3 and as a desktop version. The application allows analyzing the compatibility of barcodes on a si...
| Main Authors: | , , , |
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| Format: | Article |
| Language: | English |
| Published: |
Public Library of Science (PLoS)
2021-01-01
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| Series: | PLoS ONE |
| Online Access: | https://doi.org/10.1371/journal.pone.0247532 |
| _version_ | 1818891769647988736 |
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| author | Irina Bulusheva Vera Belova Boris Nikashin Dmitriy Korostin |
| author_facet | Irina Bulusheva Vera Belova Boris Nikashin Dmitriy Korostin |
| author_sort | Irina Bulusheva |
| collection | DOAJ |
| description | Here we present the devised BC-store-a program for analyzing and selecting sets of barcodes for sequencing on platforms manufactured by MGI Tech (China). The app is available as an open source in Python3 and as a desktop version. The application allows analyzing the compatibility of barcodes on a single lane of a flow cell in a set in the case of equal and arbitrary fractions. In addition, with the help of this tool barcodes can be added to an existing set with custom share options. In this paper we describe how BC-store works for different tasks and consider the effectiveness of using BC-store in sequence lab routine tasks. |
| first_indexed | 2024-12-19T17:46:05Z |
| format | Article |
| id | doaj.art-6aa3b62b380945cd9d50586c641da97c |
| institution | Directory Open Access Journal |
| issn | 1932-6203 |
| language | English |
| last_indexed | 2024-12-19T17:46:05Z |
| publishDate | 2021-01-01 |
| publisher | Public Library of Science (PLoS) |
| record_format | Article |
| series | PLoS ONE |
| spelling | doaj.art-6aa3b62b380945cd9d50586c641da97c2022-12-21T20:12:03ZengPublic Library of Science (PLoS)PLoS ONE1932-62032021-01-01163e024753210.1371/journal.pone.0247532BC-store: A program for MGISEQ barcode sets analysis.Irina BulushevaVera BelovaBoris NikashinDmitriy KorostinHere we present the devised BC-store-a program for analyzing and selecting sets of barcodes for sequencing on platforms manufactured by MGI Tech (China). The app is available as an open source in Python3 and as a desktop version. The application allows analyzing the compatibility of barcodes on a single lane of a flow cell in a set in the case of equal and arbitrary fractions. In addition, with the help of this tool barcodes can be added to an existing set with custom share options. In this paper we describe how BC-store works for different tasks and consider the effectiveness of using BC-store in sequence lab routine tasks.https://doi.org/10.1371/journal.pone.0247532 |
| spellingShingle | Irina Bulusheva Vera Belova Boris Nikashin Dmitriy Korostin BC-store: A program for MGISEQ barcode sets analysis. PLoS ONE |
| title | BC-store: A program for MGISEQ barcode sets analysis. |
| title_full | BC-store: A program for MGISEQ barcode sets analysis. |
| title_fullStr | BC-store: A program for MGISEQ barcode sets analysis. |
| title_full_unstemmed | BC-store: A program for MGISEQ barcode sets analysis. |
| title_short | BC-store: A program for MGISEQ barcode sets analysis. |
| title_sort | bc store a program for mgiseq barcode sets analysis |
| url | https://doi.org/10.1371/journal.pone.0247532 |
| work_keys_str_mv | AT irinabulusheva bcstoreaprogramformgiseqbarcodesetsanalysis AT verabelova bcstoreaprogramformgiseqbarcodesetsanalysis AT borisnikashin bcstoreaprogramformgiseqbarcodesetsanalysis AT dmitriykorostin bcstoreaprogramformgiseqbarcodesetsanalysis |