The complete chloroplast sequence of Roscoea humeana (Zingiberaceae): an alpine ginger in the Hengduan Mountains, China
The complete chloroplast genome sequence of Roscoea humeana (Zingiberaceae), an alpine ginger in the Hengduan Mountains, China is reported in this study. The complete chloroplast genome is 160,288 base pairs (bp) in length, containing two inverted repeat (IRa and IRb) regions of 26,852 bp, which was...
| Main Authors: | , , |
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| Format: | Article |
| Language: | English |
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Taylor & Francis Group
2019-01-01
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| Series: | Mitochondrial DNA. Part B. Resources |
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| Online Access: | http://dx.doi.org/10.1080/23802359.2019.1598795 |
| _version_ | 1797639857313415168 |
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| author | Xing-Fu Zhu Xiang-Qin Yu Jian-Li Zhao |
| author_facet | Xing-Fu Zhu Xiang-Qin Yu Jian-Li Zhao |
| author_sort | Xing-Fu Zhu |
| collection | DOAJ |
| description | The complete chloroplast genome sequence of Roscoea humeana (Zingiberaceae), an alpine ginger in the Hengduan Mountains, China is reported in this study. The complete chloroplast genome is 160,288 base pairs (bp) in length, containing two inverted repeat (IRa and IRb) regions of 26,852 bp, which was separated by a small single-copy region of 18,788 bp and a large single-copy region of 87,796 bp. The overall GC contents of the plastid genome were 36.1%. In total, 116 unique genes were annotated and they were consisted of 82 protein-coding genes, 30 tRNA genes, and four rRNA genes. Phylogenetic analysis based on 33 chloroplast genomes indicates that R. humeana is closely related to Zingiber spectabile and Z. officinale. |
| first_indexed | 2024-03-11T13:23:34Z |
| format | Article |
| id | doaj.art-6b57fa92bd27462b814d37cfe2e6de57 |
| institution | Directory Open Access Journal |
| issn | 2380-2359 |
| language | English |
| last_indexed | 2024-03-11T13:23:34Z |
| publishDate | 2019-01-01 |
| publisher | Taylor & Francis Group |
| record_format | Article |
| series | Mitochondrial DNA. Part B. Resources |
| spelling | doaj.art-6b57fa92bd27462b814d37cfe2e6de572023-11-03T10:06:43ZengTaylor & Francis GroupMitochondrial DNA. Part B. Resources2380-23592019-01-01411398139910.1080/23802359.2019.15987951598795The complete chloroplast sequence of Roscoea humeana (Zingiberaceae): an alpine ginger in the Hengduan Mountains, ChinaXing-Fu Zhu0Xiang-Qin Yu1Jian-Li Zhao2Chinese Academy of SciencesChinese Academy of SciencesYunnan UniversityThe complete chloroplast genome sequence of Roscoea humeana (Zingiberaceae), an alpine ginger in the Hengduan Mountains, China is reported in this study. The complete chloroplast genome is 160,288 base pairs (bp) in length, containing two inverted repeat (IRa and IRb) regions of 26,852 bp, which was separated by a small single-copy region of 18,788 bp and a large single-copy region of 87,796 bp. The overall GC contents of the plastid genome were 36.1%. In total, 116 unique genes were annotated and they were consisted of 82 protein-coding genes, 30 tRNA genes, and four rRNA genes. Phylogenetic analysis based on 33 chloroplast genomes indicates that R. humeana is closely related to Zingiber spectabile and Z. officinale.http://dx.doi.org/10.1080/23802359.2019.1598795alpine gingerchloroplastroscoea humeanaphylogenetic analysis |
| spellingShingle | Xing-Fu Zhu Xiang-Qin Yu Jian-Li Zhao The complete chloroplast sequence of Roscoea humeana (Zingiberaceae): an alpine ginger in the Hengduan Mountains, China Mitochondrial DNA. Part B. Resources alpine ginger chloroplast roscoea humeana phylogenetic analysis |
| title | The complete chloroplast sequence of Roscoea humeana (Zingiberaceae): an alpine ginger in the Hengduan Mountains, China |
| title_full | The complete chloroplast sequence of Roscoea humeana (Zingiberaceae): an alpine ginger in the Hengduan Mountains, China |
| title_fullStr | The complete chloroplast sequence of Roscoea humeana (Zingiberaceae): an alpine ginger in the Hengduan Mountains, China |
| title_full_unstemmed | The complete chloroplast sequence of Roscoea humeana (Zingiberaceae): an alpine ginger in the Hengduan Mountains, China |
| title_short | The complete chloroplast sequence of Roscoea humeana (Zingiberaceae): an alpine ginger in the Hengduan Mountains, China |
| title_sort | complete chloroplast sequence of roscoea humeana zingiberaceae an alpine ginger in the hengduan mountains china |
| topic | alpine ginger chloroplast roscoea humeana phylogenetic analysis |
| url | http://dx.doi.org/10.1080/23802359.2019.1598795 |
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