Chloroplast genome sequence of Solanum demissum, a wild tuber-bearing species was completed

Solanum demissum is a wild tuber-bearing species belonging to Solanaceae family. The complete chloroplast genome of S. demissum was constituted by de novo assembly using a small amount of whole genome sequencing data. The chloroplast genome of S. demissum was circular DNA molecule with a length of 1...

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Bibliographic Details
Main Authors: Kwang-Soo Cho, Ji-Hong Cho, Young-Eun Park, Tae-Ho Park
Format: Article
Language:English
Published: Taylor & Francis Group 2019-01-01
Series:Mitochondrial DNA. Part B. Resources
Subjects:
Online Access:http://dx.doi.org/10.1080/23802359.2019.1612716
Description
Summary:Solanum demissum is a wild tuber-bearing species belonging to Solanaceae family. The complete chloroplast genome of S. demissum was constituted by de novo assembly using a small amount of whole genome sequencing data. The chloroplast genome of S. demissum was circular DNA molecule with a length of 155,558 bp and consisted of 85,999 bp of large single copy, 18,373 bp of small single copy, and 25,593 bp of a pair of inverted repeat regions. A total of 158 genes were annotated including 105 protein-coding genes, 45 tRNA genes, and 8 rRNA genes. Maximum likelihood phylogenetic analysis with 30 Solanaceae species revealed that S. demissum is most closely grouped with S. hougasii and S. stoloniferum.
ISSN:2380-2359