Dynamic metabolomics differentiates between carbon and energy starvation in recombinant <it>Saccharomyces cerevisiae</it> fermenting xylose

Dynamic metabolomics differentiates between carbon and energy starvation in recombinant <it>Saccharomyces cerevisiae</it> fermenting xylose

<p>Abstract</p> <p>Background</p> <p>The concerted effects of changes in gene expression due to changes in the environment are ultimately reflected in the metabolome. Dynamics of metabolite concentrations under a certain condition can therefore give a description of the...

Full description

Bibliographic Details
Main Authors:	Bergdahl Basti, Heer Dominik, Sauer Uwe, Hahn-Hägerdal Bärbel, van Niel Ed WJ
Format:	Article
Language:	English
Published:	BMC 2012-05-01
Series:	Biotechnology for Biofuels
Subjects:	Metabolomics Yeast metabolism Xylose fermentation Metabolic status Starvation Bioethanol
Online Access:	http://www.biotechnologyforbiofuels.com/content/5/1/34

Similar Items

d-xylose accelerated death of pentose metabolizing Saccharomyces cerevisiae
by: Jeroen G. Nijland, et al.
Published: (2023-04-01)

Systematic improvement of isobutanol production from d-xylose in engineered Saccharomyces cerevisiae
by: Peerada Promdonkoy, et al.
Published: (2019-10-01)

An atlas of rational genetic engineering strategies for improved xylose metabolism in Saccharomyces cerevisiae
by: Beatriz de Oliveira Vargas, et al.
Published: (2023-11-01)

Comparative assessment of fermentative capacity of different xylose-consuming yeasts
by: Henrique César Teixeira Veras, et al.
Published: (2017-09-01)

Heterologous xylose isomerase pathway and evolutionary engineering improve xylose utilization in Saccharomyces cerevisiae
by: Xin eQi, et al.
Published: (2015-10-01)

Xylose fermentation efficiency of industrial Saccharomyces cerevisiae yeast with separate or combined xylose reductase/xylitol dehydrogenase and xylose isomerase pathways
by: Joana T. Cunha, et al.
Published: (2019-01-01)

Simulating Extracellular Glucose Signals Enhances Xylose Metabolism in Recombinant <i>Saccharomyces cerevisiae</i>
by: Meiling Wu, et al.
Published: (2020-01-01)

Production of fuels and chemicals from xylose by engineered Saccharomyces cerevisiae: a review and perspective
by: Suryang Kwak, et al.
Published: (2017-05-01)

Disruption of the transcription factors Thi2p and Nrm1p alleviates the post-glucose effect on xylose utilization in Saccharomyces cerevisiae
by: Shan Wei, et al.
Published: (2018-04-01)

Novel xylose transporter Cs4130 expands the sugar uptake repertoire in recombinant Saccharomyces cerevisiae strains at high xylose concentrations
by: João Gabriel Ribeiro Bueno, et al.
Published: (2020-08-01)

Improved simultaneous co-fermentation of glucose and xylose by Saccharomyces cerevisiae for efficient lignocellulosic biorefinery
by: Phuong Hoang Nguyen Tran, et al.
Published: (2020-01-01)

Directed evolution and secretory expression of xylose isomerase for improved utilisation of xylose in Saccharomyces cerevisiae
by: Jung-Hoon Bae, et al.
Published: (2021-11-01)

Overview of Catalytic Properties of Fungal Xylose Reductases and Molecular Engineering Approaches for Improved Xylose Utilisation in Yeast
by: Sk Amir Hossain, et al.
Published: (2018-03-01)

Impact of xylose epimerase on sugar assimilation and sensing in recombinant Saccharomyces cerevisiae carrying different xylose-utilization pathways
by: Viktor C. Persson, et al.
Published: (2023-11-01)

Comparison of xylose fermentation by two high-performance engineered strains of Saccharomyces cerevisiae
by: Xin Li, et al.
Published: (2016-03-01)

Molecular evolutionary engineering of xylose isomerase to improve its catalytic activity and performance of micro-aerobic glucose/xylose co-fermentation in Saccharomyces cerevisiae
by: Taisuke Seike, et al.
Published: (2019-06-01)

Identification of Mutations Responsible for Improved Xylose Utilization in an Adapted Xylose Isomerase Expressing <i>Saccharomyces cerevisiae</i> Strain
by: Ronald E. Hector, et al.
Published: (2022-11-01)

Engineering of Saccharomyces cerevisiae for co-fermentation of glucose and xylose: Current state and perspectives
by: Yali Qiu, et al.
Published: (2023-09-01)

Structure-based directed evolution improves S. cerevisiae growth on xylose by influencing in vivo enzyme performance
by: Misun Lee, et al.
Published: (2020-01-01)

Engineering xylose metabolism in thraustochytrid T18
by: Alexandra Merkx-Jacques, et al.
Published: (2018-09-01)

Recombinant Diploid Saccharomyces cerevisiae Strain Development for Rapid Glucose and Xylose Co-Fermentation
by: Tingting Liu, et al.
Published: (2018-07-01)

Xylose: absorption, fermentation, and post-absorptive metabolism in the pig
by: Nichole F. Huntley, et al.
Published: (2018-01-01)

A design–build–test cycle using modeling and experiments reveals interdependencies between upper glycolysis and xylose uptake in recombinant S. cerevisiae and improves predictive capabilities of large-scale kinetic models
by: Ljubisa Miskovic, et al.
Published: (2017-06-01)

Application of Metabolomics in the Study of Starvation-Induced Autophagy in <i>Saccharomyces cerevisiae</i>: A Scoping Review
by: Muhammad Luqman Nasaruddin, et al.
Published: (2021-11-01)

Improving Xylose Fermentation in <i>Saccharomyces cerevisiae</i> by Expressing Nuclear-Localized Hexokinase 2
by: Liyuan Zheng, et al.
Published: (2020-06-01)

Minimize the Xylitol Production in Saccharomyces cerevisiae by Balancing the Xylose Redox Metabolic Pathway
by: Yixuan Zhu, et al.
Published: (2021-02-01)

Comparison of heterologous xylose transporters in recombinant <it>Saccharomyces cerevisiae</it>
by: Hahn-Hägerdal Bärbel, et al.
Published: (2010-03-01)

Deletion of NGG1 in a recombinant Saccharomyces cerevisiae improved xylose utilization and affected transcription of genes related to amino acid metabolism
by: Cheng Cheng, et al.
Published: (2022-09-01)

Effect of the Two-Stage Autohydrolysis of Hardwood on the Enzymatic Saccharification and Subsequent Fermentation with an Efficient Xylose-Utilizing Saccharomyces cerevisiae
by: Junyeong Park, et al.
Published: (2016-09-01)

In-situ muconic acid extraction reveals sugar consumption bottleneck in a xylose-utilizing Saccharomyces cerevisiae strain
by: Thomas Nicolaï, et al.
Published: (2021-06-01)

Enhanced Bioethanol Production from Industrial Xylose Residue Using Efficient Delignification
by: Tian Zhou, et al.
Published: (2016-07-01)

RECOMBINANT STRAINS OF SACCHAROMYCES CEREVISIAE FOR ETHANOL PRODUCTION FROM PLANT BIOMASS
by: A. S. Rozanov, et al.
Published: (2015-01-01)

Xylose Metabolism in Bacteria—Opportunities and Challenges towards Efficient Lignocellulosic Biomass-Based Biorefineries
by: Rafael Domingues, et al.
Published: (2021-08-01)

Comparing the xylose reductase/xylitol dehydrogenase and xylose isomerase pathways in arabinose and xylose fermenting <it>Saccharomyces cerevisiae </it>strains
by: Hahn-Hägerdal Bärbel, et al.
Published: (2008-10-01)

Integrins in disguise – mechanosensors in Saccharomyces cerevisiae as functional integrin analogues
by: Tarek Elhasi, et al.
Published: (2019-07-01)

Machine learning and comparative genomics approaches for the discovery of xylose transporters in yeast
by: Mateus Bernabe Fiamenghi, et al.
Published: (2022-05-01)

Engineering the xylose metabolism in Schizochytrium sp. to improve the utilization of lignocellulose
by: Ling-Ru Wang, et al.
Published: (2022-10-01)

Comparison of the xylose reductase-xylitol dehydrogenase and the xylose isomerase pathways for xylose fermentation by recombinant <it>Saccharomyces cerevisiae</it>
by: Hahn-Hägerdal Bärbel, et al.
Published: (2007-02-01)

Co-Fermentation of Glucose–Xylose–Cellobiose–XOS Mixtures Using a Synthetic Consortium of Recombinant <i>Saccharomyces cerevisiae</i> Strains
by: Ning Yan, et al.
Published: (2023-08-01)

Lipid accumulation from glucose and xylose in an engineered, naturally oleaginous strain of Saccharomyces cerevisiae
by: Eric Knoshaug, et al.
Published: (2018-06-01)