The intrinsic dimension of protein sequence evolution.
It is well known that, in order to preserve its structure and function, a protein cannot change its sequence at random, but only by mutations occurring preferentially at specific locations. We here investigate quantitatively the amount of variability that is allowed in protein sequence evolution, by...
Main Authors: | Elena Facco, Andrea Pagnani, Elena Tea Russo, Alessandro Laio |
---|---|
Format: | Article |
Language: | English |
Published: |
Public Library of Science (PLoS)
2019-04-01
|
Series: | PLoS Computational Biology |
Online Access: | http://europepmc.org/articles/PMC6472826?pdf=render |
Similar Items
-
Density Peak clustering of protein sequences associated to a Pfam clan reveals clear similarities and interesting differences with respect to manual family annotation
by: Elena Tea Russo, et al.
Published: (2021-03-01) -
The generalized ratios intrinsic dimension estimator
by: Francesco Denti, et al.
Published: (2022-11-01) -
DPCfam: Unsupervised protein family classification by Density Peak Clustering of large sequence datasets.
by: Elena Tea Russo, et al.
Published: (2022-10-01) -
Inter-Protein Sequence Co-Evolution Predicts Known Physical Interactions in Bacterial Ribosomes and the Trp Operon.
by: Christoph Feinauer, et al.
Published: (2016-01-01) -
Rapid evolution of virus sequences in intrinsically disordered protein regions.
by: Leonid Gitlin, et al.
Published: (2014-12-01)