The complete chloroplast genome of a Korean endemic plant Chrysosplenium aureobracteatum Y.I. Kim & Y.D. Kim (Saxifragaceae)
Chrysosplenium aureobracteatum is endemic to Korea. This species is primarily found in Gyeonggi Province and Gangwon Province in the central part of the Korean Peninsula. The complete chloroplast genome (cpDNA) sequence of C. aureobracteatum was characterized using Illumina paired-end sequencing. Th...
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| Format: | Article |
| Language: | English |
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Taylor & Francis Group
2018-01-01
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| Series: | Mitochondrial DNA. Part B. Resources |
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| Online Access: | http://dx.doi.org/10.1080/23802359.2018.1450668 |
| _version_ | 1827774290394611712 |
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| author | Yong-In Kim Jung-Hoon Lee Young-Dong Kim |
| author_facet | Yong-In Kim Jung-Hoon Lee Young-Dong Kim |
| author_sort | Yong-In Kim |
| collection | DOAJ |
| description | Chrysosplenium aureobracteatum is endemic to Korea. This species is primarily found in Gyeonggi Province and Gangwon Province in the central part of the Korean Peninsula. The complete chloroplast genome (cpDNA) sequence of C. aureobracteatum was characterized using Illumina paired-end sequencing. The cpDNA is 153,102 bp in length and contains a pair of 26,017-bp inverted repeats (IRs), a large single copy (LSC) region of 83,752 bp, and a small single copy (SSC) region of 17,316 bp. It contains 131 genes, including 84 protein-coding genes (78 PCG species), eight ribosomal RNA genes (four RNA species), 37 transfer RNA genes (30 tRNA species), and one pseudogene (accD). The overall G + C content of the whole genome is 37.3%. Phylogenetic analysis based on 24 chloroplast genomes indicates that C. aureobracteatum is closely related to Bergenia scopulosa. |
| first_indexed | 2024-03-11T13:35:22Z |
| format | Article |
| id | doaj.art-6e5a6a56e45f4d4b89b28789c5f18108 |
| institution | Directory Open Access Journal |
| issn | 2380-2359 |
| language | English |
| last_indexed | 2024-03-11T13:35:22Z |
| publishDate | 2018-01-01 |
| publisher | Taylor & Francis Group |
| record_format | Article |
| series | Mitochondrial DNA. Part B. Resources |
| spelling | doaj.art-6e5a6a56e45f4d4b89b28789c5f181082023-11-02T15:57:22ZengTaylor & Francis GroupMitochondrial DNA. Part B. Resources2380-23592018-01-013138038110.1080/23802359.2018.14506681450668The complete chloroplast genome of a Korean endemic plant Chrysosplenium aureobracteatum Y.I. Kim & Y.D. Kim (Saxifragaceae)Yong-In Kim0Jung-Hoon Lee1Young-Dong Kim2International Biological Material Research Center, Korea Research Institute of Bioscience and BiotechnologyHallym UniversityHallym UniversityChrysosplenium aureobracteatum is endemic to Korea. This species is primarily found in Gyeonggi Province and Gangwon Province in the central part of the Korean Peninsula. The complete chloroplast genome (cpDNA) sequence of C. aureobracteatum was characterized using Illumina paired-end sequencing. The cpDNA is 153,102 bp in length and contains a pair of 26,017-bp inverted repeats (IRs), a large single copy (LSC) region of 83,752 bp, and a small single copy (SSC) region of 17,316 bp. It contains 131 genes, including 84 protein-coding genes (78 PCG species), eight ribosomal RNA genes (four RNA species), 37 transfer RNA genes (30 tRNA species), and one pseudogene (accD). The overall G + C content of the whole genome is 37.3%. Phylogenetic analysis based on 24 chloroplast genomes indicates that C. aureobracteatum is closely related to Bergenia scopulosa.http://dx.doi.org/10.1080/23802359.2018.1450668saxifragaceaechrysospleniumchloroplast genomeendemic species |
| spellingShingle | Yong-In Kim Jung-Hoon Lee Young-Dong Kim The complete chloroplast genome of a Korean endemic plant Chrysosplenium aureobracteatum Y.I. Kim & Y.D. Kim (Saxifragaceae) Mitochondrial DNA. Part B. Resources saxifragaceae chrysosplenium chloroplast genome endemic species |
| title | The complete chloroplast genome of a Korean endemic plant Chrysosplenium aureobracteatum Y.I. Kim & Y.D. Kim (Saxifragaceae) |
| title_full | The complete chloroplast genome of a Korean endemic plant Chrysosplenium aureobracteatum Y.I. Kim & Y.D. Kim (Saxifragaceae) |
| title_fullStr | The complete chloroplast genome of a Korean endemic plant Chrysosplenium aureobracteatum Y.I. Kim & Y.D. Kim (Saxifragaceae) |
| title_full_unstemmed | The complete chloroplast genome of a Korean endemic plant Chrysosplenium aureobracteatum Y.I. Kim & Y.D. Kim (Saxifragaceae) |
| title_short | The complete chloroplast genome of a Korean endemic plant Chrysosplenium aureobracteatum Y.I. Kim & Y.D. Kim (Saxifragaceae) |
| title_sort | complete chloroplast genome of a korean endemic plant chrysosplenium aureobracteatum y i kim y d kim saxifragaceae |
| topic | saxifragaceae chrysosplenium chloroplast genome endemic species |
| url | http://dx.doi.org/10.1080/23802359.2018.1450668 |
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