Characterization of the complete mitochondrial genome of brown barracuda, Sphyraena pinguis (Perciformes: Sphyraenidae)
The entire mitochondrial genome sequence of Sphyraena pinguis collected from Korean water was determined by the Next Generation Sequencing (NGS) technology. Its total length was 16,620 bps in length, which possessed the canonical 37 genes in the eukaryotes. Unusual start codon was exclusively found...
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| Format: | Article |
| Language: | English |
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Taylor & Francis Group
2020-07-01
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| Series: | Mitochondrial DNA. Part B. Resources |
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| Online Access: | http://dx.doi.org/10.1080/23802359.2020.1797588 |
| _version_ | 1827772781478019072 |
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| author | Nazia Tabassum Wongyu Park Hae-Ja Baek Jae-Young Je Hyun-Woo Kim |
| author_facet | Nazia Tabassum Wongyu Park Hae-Ja Baek Jae-Young Je Hyun-Woo Kim |
| author_sort | Nazia Tabassum |
| collection | DOAJ |
| description | The entire mitochondrial genome sequence of Sphyraena pinguis collected from Korean water was determined by the Next Generation Sequencing (NGS) technology. Its total length was 16,620 bps in length, which possessed the canonical 37 genes in the eukaryotes. Unusual start codon was exclusively found in COX1(GTG), while incomplete stop codons (TA–/T—) were identified in ATP6, COX2, ND3, ND4, and Cyt b. A phylogenetic analysis with currently identified full mitogenomes in Perciformes, S. pinguis was most closely related to S. barracuda (76.87%) and S. jello (76.84%). This mitogenome sequence would explain the evolution of genus Sphyraena. |
| first_indexed | 2024-03-11T13:12:36Z |
| format | Article |
| id | doaj.art-6e740b13e2c54a2c8efe924623705b9b |
| institution | Directory Open Access Journal |
| issn | 2380-2359 |
| language | English |
| last_indexed | 2024-03-11T13:12:36Z |
| publishDate | 2020-07-01 |
| publisher | Taylor & Francis Group |
| record_format | Article |
| series | Mitochondrial DNA. Part B. Resources |
| spelling | doaj.art-6e740b13e2c54a2c8efe924623705b9b2023-11-03T14:00:32ZengTaylor & Francis GroupMitochondrial DNA. Part B. Resources2380-23592020-07-01533042304310.1080/23802359.2020.17975881797588Characterization of the complete mitochondrial genome of brown barracuda, Sphyraena pinguis (Perciformes: Sphyraenidae)Nazia Tabassum0Wongyu Park1Hae-Ja Baek2Jae-Young Je3Hyun-Woo Kim4Industrial Convergence Bionix Engineering, Pukyong National UniversityDepartment of Marine Biology, Pukyong National UniversityDepartment of Marine Biology, Pukyong National UniversityDepartment of Marine-Bio Convergence Science, Pukyong National UniversityIndustrial Convergence Bionix Engineering, Pukyong National UniversityThe entire mitochondrial genome sequence of Sphyraena pinguis collected from Korean water was determined by the Next Generation Sequencing (NGS) technology. Its total length was 16,620 bps in length, which possessed the canonical 37 genes in the eukaryotes. Unusual start codon was exclusively found in COX1(GTG), while incomplete stop codons (TA–/T—) were identified in ATP6, COX2, ND3, ND4, and Cyt b. A phylogenetic analysis with currently identified full mitogenomes in Perciformes, S. pinguis was most closely related to S. barracuda (76.87%) and S. jello (76.84%). This mitogenome sequence would explain the evolution of genus Sphyraena.http://dx.doi.org/10.1080/23802359.2020.1797588barracudamiseqmitogenomekoreasphyraena pinguis |
| spellingShingle | Nazia Tabassum Wongyu Park Hae-Ja Baek Jae-Young Je Hyun-Woo Kim Characterization of the complete mitochondrial genome of brown barracuda, Sphyraena pinguis (Perciformes: Sphyraenidae) Mitochondrial DNA. Part B. Resources barracuda miseq mitogenome korea sphyraena pinguis |
| title | Characterization of the complete mitochondrial genome of brown barracuda, Sphyraena pinguis (Perciformes: Sphyraenidae) |
| title_full | Characterization of the complete mitochondrial genome of brown barracuda, Sphyraena pinguis (Perciformes: Sphyraenidae) |
| title_fullStr | Characterization of the complete mitochondrial genome of brown barracuda, Sphyraena pinguis (Perciformes: Sphyraenidae) |
| title_full_unstemmed | Characterization of the complete mitochondrial genome of brown barracuda, Sphyraena pinguis (Perciformes: Sphyraenidae) |
| title_short | Characterization of the complete mitochondrial genome of brown barracuda, Sphyraena pinguis (Perciformes: Sphyraenidae) |
| title_sort | characterization of the complete mitochondrial genome of brown barracuda sphyraena pinguis perciformes sphyraenidae |
| topic | barracuda miseq mitogenome korea sphyraena pinguis |
| url | http://dx.doi.org/10.1080/23802359.2020.1797588 |
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