Genome of Paspalum vaginatum and the role of trehalose mediated autophagy in increasing maize biomass

Paspalum vaginatum is a stress tolerant wild relative of maize and sorghum. Here, the authors assemble its genome at pseudomolecule level and reveal the role of trehalose mediated autophagy in increasing maize biomass productivity under nutrient-deficit conditions.

Bibliographic Details
Main Authors: Guangchao Sun, Nishikant Wase, Shengqiang Shu, Jerry Jenkins, Bangjun Zhou, J. Vladimir Torres-Rodríguez, Cindy Chen, Laura Sandor, Chris Plott, Yuko Yoshinga, Christopher Daum, Peng Qi, Kerrie Barry, Anna Lipzen, Luke Berry, Connor Pedersen, Thomas Gottilla, Ashley Foltz, Huihui Yu, Ronan O’Malley, Chi Zhang, Katrien M. Devos, Brandi Sigmon, Bin Yu, Toshihiro Obata, Jeremy Schmutz, James C. Schnable
Format: Article
Language:English
Published: Nature Portfolio 2022-12-01
Series:Nature Communications
Online Access:https://doi.org/10.1038/s41467-022-35507-8
_version_ 1811198527574900736
author Guangchao Sun
Nishikant Wase
Shengqiang Shu
Jerry Jenkins
Bangjun Zhou
J. Vladimir Torres-Rodríguez
Cindy Chen
Laura Sandor
Chris Plott
Yuko Yoshinga
Christopher Daum
Peng Qi
Kerrie Barry
Anna Lipzen
Luke Berry
Connor Pedersen
Thomas Gottilla
Ashley Foltz
Huihui Yu
Ronan O’Malley
Chi Zhang
Katrien M. Devos
Brandi Sigmon
Bin Yu
Toshihiro Obata
Jeremy Schmutz
James C. Schnable
author_facet Guangchao Sun
Nishikant Wase
Shengqiang Shu
Jerry Jenkins
Bangjun Zhou
J. Vladimir Torres-Rodríguez
Cindy Chen
Laura Sandor
Chris Plott
Yuko Yoshinga
Christopher Daum
Peng Qi
Kerrie Barry
Anna Lipzen
Luke Berry
Connor Pedersen
Thomas Gottilla
Ashley Foltz
Huihui Yu
Ronan O’Malley
Chi Zhang
Katrien M. Devos
Brandi Sigmon
Bin Yu
Toshihiro Obata
Jeremy Schmutz
James C. Schnable
author_sort Guangchao Sun
collection DOAJ
description Paspalum vaginatum is a stress tolerant wild relative of maize and sorghum. Here, the authors assemble its genome at pseudomolecule level and reveal the role of trehalose mediated autophagy in increasing maize biomass productivity under nutrient-deficit conditions.
first_indexed 2024-04-12T01:33:11Z
format Article
id doaj.art-6ee641227d8a49c0877b2e057d75b3e1
institution Directory Open Access Journal
issn 2041-1723
language English
last_indexed 2024-04-12T01:33:11Z
publishDate 2022-12-01
publisher Nature Portfolio
record_format Article
series Nature Communications
spelling doaj.art-6ee641227d8a49c0877b2e057d75b3e12022-12-22T03:53:26ZengNature PortfolioNature Communications2041-17232022-12-0113112010.1038/s41467-022-35507-8Genome of Paspalum vaginatum and the role of trehalose mediated autophagy in increasing maize biomassGuangchao Sun0Nishikant Wase1Shengqiang Shu2Jerry Jenkins3Bangjun Zhou4J. Vladimir Torres-Rodríguez5Cindy Chen6Laura Sandor7Chris Plott8Yuko Yoshinga9Christopher Daum10Peng Qi11Kerrie Barry12Anna Lipzen13Luke Berry14Connor Pedersen15Thomas Gottilla16Ashley Foltz17Huihui Yu18Ronan O’Malley19Chi Zhang20Katrien M. Devos21Brandi Sigmon22Bin Yu23Toshihiro Obata24Jeremy Schmutz25James C. Schnable26Quantitative Life Sciences Initiative, University of Nebraska-LincolnCenter for Plant Science Innovation, University of Nebraska-LincolnDepartment of Energy Joint Genome Institute, Lawrence Berkeley National LaboratoryHudsonAlpha Institute for BiotechnologyCenter for Plant Science Innovation, University of Nebraska-LincolnQuantitative Life Sciences Initiative, University of Nebraska-LincolnDepartment of Energy Joint Genome Institute, Lawrence Berkeley National LaboratoryDepartment of Energy Joint Genome Institute, Lawrence Berkeley National LaboratoryHudsonAlpha Institute for BiotechnologyDepartment of Energy Joint Genome Institute, Lawrence Berkeley National LaboratoryDepartment of Energy Joint Genome Institute, Lawrence Berkeley National LaboratoryInstitute of Plant Breeding, Genetics and Genomics, Department of Crop and Soil Sciences, University of GeorgiaDepartment of Energy Joint Genome Institute, Lawrence Berkeley National LaboratoryDepartment of Energy Joint Genome Institute, Lawrence Berkeley National LaboratoryCenter for Plant Science Innovation, University of Nebraska-LincolnCenter for Plant Science Innovation, University of Nebraska-LincolnInstitute of Plant Breeding, Genetics and Genomics, Department of Crop and Soil Sciences, University of GeorgiaQuantitative Life Sciences Initiative, University of Nebraska-LincolnCenter for Plant Science Innovation, University of Nebraska-LincolnDepartment of Energy Joint Genome Institute, Lawrence Berkeley National LaboratoryCenter for Plant Science Innovation, University of Nebraska-LincolnInstitute of Plant Breeding, Genetics and Genomics, Department of Crop and Soil Sciences, University of GeorgiaDepartment of Plant Pathology, University of Nebraska-LincolnCenter for Plant Science Innovation, University of Nebraska-LincolnCenter for Plant Science Innovation, University of Nebraska-LincolnDepartment of Energy Joint Genome Institute, Lawrence Berkeley National LaboratoryQuantitative Life Sciences Initiative, University of Nebraska-LincolnPaspalum vaginatum is a stress tolerant wild relative of maize and sorghum. Here, the authors assemble its genome at pseudomolecule level and reveal the role of trehalose mediated autophagy in increasing maize biomass productivity under nutrient-deficit conditions.https://doi.org/10.1038/s41467-022-35507-8
spellingShingle Guangchao Sun
Nishikant Wase
Shengqiang Shu
Jerry Jenkins
Bangjun Zhou
J. Vladimir Torres-Rodríguez
Cindy Chen
Laura Sandor
Chris Plott
Yuko Yoshinga
Christopher Daum
Peng Qi
Kerrie Barry
Anna Lipzen
Luke Berry
Connor Pedersen
Thomas Gottilla
Ashley Foltz
Huihui Yu
Ronan O’Malley
Chi Zhang
Katrien M. Devos
Brandi Sigmon
Bin Yu
Toshihiro Obata
Jeremy Schmutz
James C. Schnable
Genome of Paspalum vaginatum and the role of trehalose mediated autophagy in increasing maize biomass
Nature Communications
title Genome of Paspalum vaginatum and the role of trehalose mediated autophagy in increasing maize biomass
title_full Genome of Paspalum vaginatum and the role of trehalose mediated autophagy in increasing maize biomass
title_fullStr Genome of Paspalum vaginatum and the role of trehalose mediated autophagy in increasing maize biomass
title_full_unstemmed Genome of Paspalum vaginatum and the role of trehalose mediated autophagy in increasing maize biomass
title_short Genome of Paspalum vaginatum and the role of trehalose mediated autophagy in increasing maize biomass
title_sort genome of paspalum vaginatum and the role of trehalose mediated autophagy in increasing maize biomass
url https://doi.org/10.1038/s41467-022-35507-8
work_keys_str_mv AT guangchaosun genomeofpaspalumvaginatumandtheroleoftrehalosemediatedautophagyinincreasingmaizebiomass
AT nishikantwase genomeofpaspalumvaginatumandtheroleoftrehalosemediatedautophagyinincreasingmaizebiomass
AT shengqiangshu genomeofpaspalumvaginatumandtheroleoftrehalosemediatedautophagyinincreasingmaizebiomass
AT jerryjenkins genomeofpaspalumvaginatumandtheroleoftrehalosemediatedautophagyinincreasingmaizebiomass
AT bangjunzhou genomeofpaspalumvaginatumandtheroleoftrehalosemediatedautophagyinincreasingmaizebiomass
AT jvladimirtorresrodriguez genomeofpaspalumvaginatumandtheroleoftrehalosemediatedautophagyinincreasingmaizebiomass
AT cindychen genomeofpaspalumvaginatumandtheroleoftrehalosemediatedautophagyinincreasingmaizebiomass
AT laurasandor genomeofpaspalumvaginatumandtheroleoftrehalosemediatedautophagyinincreasingmaizebiomass
AT chrisplott genomeofpaspalumvaginatumandtheroleoftrehalosemediatedautophagyinincreasingmaizebiomass
AT yukoyoshinga genomeofpaspalumvaginatumandtheroleoftrehalosemediatedautophagyinincreasingmaizebiomass
AT christopherdaum genomeofpaspalumvaginatumandtheroleoftrehalosemediatedautophagyinincreasingmaizebiomass
AT pengqi genomeofpaspalumvaginatumandtheroleoftrehalosemediatedautophagyinincreasingmaizebiomass
AT kerriebarry genomeofpaspalumvaginatumandtheroleoftrehalosemediatedautophagyinincreasingmaizebiomass
AT annalipzen genomeofpaspalumvaginatumandtheroleoftrehalosemediatedautophagyinincreasingmaizebiomass
AT lukeberry genomeofpaspalumvaginatumandtheroleoftrehalosemediatedautophagyinincreasingmaizebiomass
AT connorpedersen genomeofpaspalumvaginatumandtheroleoftrehalosemediatedautophagyinincreasingmaizebiomass
AT thomasgottilla genomeofpaspalumvaginatumandtheroleoftrehalosemediatedautophagyinincreasingmaizebiomass
AT ashleyfoltz genomeofpaspalumvaginatumandtheroleoftrehalosemediatedautophagyinincreasingmaizebiomass
AT huihuiyu genomeofpaspalumvaginatumandtheroleoftrehalosemediatedautophagyinincreasingmaizebiomass
AT ronanomalley genomeofpaspalumvaginatumandtheroleoftrehalosemediatedautophagyinincreasingmaizebiomass
AT chizhang genomeofpaspalumvaginatumandtheroleoftrehalosemediatedautophagyinincreasingmaizebiomass
AT katrienmdevos genomeofpaspalumvaginatumandtheroleoftrehalosemediatedautophagyinincreasingmaizebiomass
AT brandisigmon genomeofpaspalumvaginatumandtheroleoftrehalosemediatedautophagyinincreasingmaizebiomass
AT binyu genomeofpaspalumvaginatumandtheroleoftrehalosemediatedautophagyinincreasingmaizebiomass
AT toshihiroobata genomeofpaspalumvaginatumandtheroleoftrehalosemediatedautophagyinincreasingmaizebiomass
AT jeremyschmutz genomeofpaspalumvaginatumandtheroleoftrehalosemediatedautophagyinincreasingmaizebiomass
AT jamescschnable genomeofpaspalumvaginatumandtheroleoftrehalosemediatedautophagyinincreasingmaizebiomass