The complete plastome sequence of Atractylodes macrocephala (Asteraceae: Cardueae), an important medicinal plant in East Asia
Atractylodes macrocephala is one of the most commonly used herbs in China, which is famous for its high medicinal value. In this study, we analyzed and characterized the complete plastome sequence of A. macrocephala. Sequence analysis indicated that the entire genome is 153,265 bp in length, consist...
| Main Authors: | , , , |
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| Format: | Article |
| Language: | English |
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Taylor & Francis Group
2020-01-01
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| Series: | Mitochondrial DNA. Part B. Resources |
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| Online Access: | http://dx.doi.org/10.1080/23802359.2020.1719926 |
| _version_ | 1827773055042060288 |
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| author | Huixia Cai Chuan Chen Yichen Wang Hongyi Wang |
| author_facet | Huixia Cai Chuan Chen Yichen Wang Hongyi Wang |
| author_sort | Huixia Cai |
| collection | DOAJ |
| description | Atractylodes macrocephala is one of the most commonly used herbs in China, which is famous for its high medicinal value. In this study, we analyzed and characterized the complete plastome sequence of A. macrocephala. Sequence analysis indicated that the entire genome is 153,265 bp in length, consisting of a large single-copy (LSC, 84,311 bp) and a small single-copy (SSC, 18,674 bp) region separated by a pair of inverted repeat (IR) regions of 25,140 bp for each. The genome contains 107 unique genes, including 80 different protein-coding genes, 23 tRNA genes, and 4 rRNA genes. The overall GC content of the genome is 37.7%. The phylogenetic analysis revealed a monophyletic Atractylodes and Cardueae. This research reports the complete plastome genome of Atractylodes macrocephala, which provides a better understanding of this important herb. |
| first_indexed | 2024-03-11T13:17:33Z |
| format | Article |
| id | doaj.art-6f1d884f1d43425c9f474e800eefb23e |
| institution | Directory Open Access Journal |
| issn | 2380-2359 |
| language | English |
| last_indexed | 2024-03-11T13:17:33Z |
| publishDate | 2020-01-01 |
| publisher | Taylor & Francis Group |
| record_format | Article |
| series | Mitochondrial DNA. Part B. Resources |
| spelling | doaj.art-6f1d884f1d43425c9f474e800eefb23e2023-11-03T11:00:22ZengTaylor & Francis GroupMitochondrial DNA. Part B. Resources2380-23592020-01-015195195210.1080/23802359.2020.17199261719926The complete plastome sequence of Atractylodes macrocephala (Asteraceae: Cardueae), an important medicinal plant in East AsiaHuixia Cai0Chuan Chen1Yichen Wang2Hongyi Wang3Laboratory of Systematic and Evolutionary Botany and Biodiversity, College of Life Sciences, Zhejiang UniversityHangzhou Botanical Garden, Hangzhou Academy of Landscape ScienceHangzhou Botanical Garden, Hangzhou Academy of Landscape ScienceHangzhou Botanical Garden, Hangzhou Academy of Landscape ScienceAtractylodes macrocephala is one of the most commonly used herbs in China, which is famous for its high medicinal value. In this study, we analyzed and characterized the complete plastome sequence of A. macrocephala. Sequence analysis indicated that the entire genome is 153,265 bp in length, consisting of a large single-copy (LSC, 84,311 bp) and a small single-copy (SSC, 18,674 bp) region separated by a pair of inverted repeat (IR) regions of 25,140 bp for each. The genome contains 107 unique genes, including 80 different protein-coding genes, 23 tRNA genes, and 4 rRNA genes. The overall GC content of the genome is 37.7%. The phylogenetic analysis revealed a monophyletic Atractylodes and Cardueae. This research reports the complete plastome genome of Atractylodes macrocephala, which provides a better understanding of this important herb.http://dx.doi.org/10.1080/23802359.2020.1719926atractylodes macrocephalacultivationplastome genomecardueaeasteraceae |
| spellingShingle | Huixia Cai Chuan Chen Yichen Wang Hongyi Wang The complete plastome sequence of Atractylodes macrocephala (Asteraceae: Cardueae), an important medicinal plant in East Asia Mitochondrial DNA. Part B. Resources atractylodes macrocephala cultivation plastome genome cardueae asteraceae |
| title | The complete plastome sequence of Atractylodes macrocephala (Asteraceae: Cardueae), an important medicinal plant in East Asia |
| title_full | The complete plastome sequence of Atractylodes macrocephala (Asteraceae: Cardueae), an important medicinal plant in East Asia |
| title_fullStr | The complete plastome sequence of Atractylodes macrocephala (Asteraceae: Cardueae), an important medicinal plant in East Asia |
| title_full_unstemmed | The complete plastome sequence of Atractylodes macrocephala (Asteraceae: Cardueae), an important medicinal plant in East Asia |
| title_short | The complete plastome sequence of Atractylodes macrocephala (Asteraceae: Cardueae), an important medicinal plant in East Asia |
| title_sort | complete plastome sequence of atractylodes macrocephala asteraceae cardueae an important medicinal plant in east asia |
| topic | atractylodes macrocephala cultivation plastome genome cardueae asteraceae |
| url | http://dx.doi.org/10.1080/23802359.2020.1719926 |
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