Phylogenetic relationship and characterization of the complete chloroplast genome of Laggera crispata, a folk herbal medicine plant in China
Laggera crispata, an herbaceous plant, has been used in Chinese medicines as anti-inflammatory, analgesic, and anti-viral. In this study, the complete chloroplast (cp) genome sequence of L. crispata was first reported. The cp genome of L. crispata is 155522 bp in length, with two inverted repeats (I...
| Main Authors: | , , , |
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| Format: | Article |
| Language: | English |
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Taylor & Francis Group
2022-06-01
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| Series: | Mitochondrial DNA. Part B. Resources |
| Subjects: | |
| Online Access: | http://dx.doi.org/10.1080/23802359.2022.2087553 |
| _version_ | 1797638576316350464 |
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| author | Zhongyu Zhou Tingting Pu Baozhong Duan Manchang Zhang |
| author_facet | Zhongyu Zhou Tingting Pu Baozhong Duan Manchang Zhang |
| author_sort | Zhongyu Zhou |
| collection | DOAJ |
| description | Laggera crispata, an herbaceous plant, has been used in Chinese medicines as anti-inflammatory, analgesic, and anti-viral. In this study, the complete chloroplast (cp) genome sequence of L. crispata was first reported. The cp genome of L. crispata is 155522 bp in length, with two inverted repeats (IR) regions of 25042 bp, the large single copy (LSC) region of 84198 bp and the small single copy (SSC) region of 21240 bp. 128 genes were predicted, including 87 protein-coding genes, 37 tRNA genes, and 8 rRNA genes. The phylogenetic analysis suggested that L. crispata is more closely related to Pluchea pteropoda and P. indica with solid bootstrap values belonging to the subfamily Inuleae of Asteraceae. |
| first_indexed | 2024-03-11T13:05:32Z |
| format | Article |
| id | doaj.art-6f4ed3cfe1bb413b93f47286fbb26b6b |
| institution | Directory Open Access Journal |
| issn | 2380-2359 |
| language | English |
| last_indexed | 2024-03-11T13:05:32Z |
| publishDate | 2022-06-01 |
| publisher | Taylor & Francis Group |
| record_format | Article |
| series | Mitochondrial DNA. Part B. Resources |
| spelling | doaj.art-6f4ed3cfe1bb413b93f47286fbb26b6b2023-11-03T14:36:04ZengTaylor & Francis GroupMitochondrial DNA. Part B. Resources2380-23592022-06-01761148115010.1080/23802359.2022.20875532087553Phylogenetic relationship and characterization of the complete chloroplast genome of Laggera crispata, a folk herbal medicine plant in ChinaZhongyu Zhou0Tingting Pu1Baozhong Duan2Manchang Zhang3College of Pharmaceutical Science, Dali UniversityCollege of Pharmaceutical Science, Dali UniversityCollege of Pharmaceutical Science, Dali UniversityCollege of Pharmaceutical Science, Dali UniversityLaggera crispata, an herbaceous plant, has been used in Chinese medicines as anti-inflammatory, analgesic, and anti-viral. In this study, the complete chloroplast (cp) genome sequence of L. crispata was first reported. The cp genome of L. crispata is 155522 bp in length, with two inverted repeats (IR) regions of 25042 bp, the large single copy (LSC) region of 84198 bp and the small single copy (SSC) region of 21240 bp. 128 genes were predicted, including 87 protein-coding genes, 37 tRNA genes, and 8 rRNA genes. The phylogenetic analysis suggested that L. crispata is more closely related to Pluchea pteropoda and P. indica with solid bootstrap values belonging to the subfamily Inuleae of Asteraceae.http://dx.doi.org/10.1080/23802359.2022.2087553laggera crispatacomplete chloroplast genomephylogenetic analysis |
| spellingShingle | Zhongyu Zhou Tingting Pu Baozhong Duan Manchang Zhang Phylogenetic relationship and characterization of the complete chloroplast genome of Laggera crispata, a folk herbal medicine plant in China Mitochondrial DNA. Part B. Resources laggera crispata complete chloroplast genome phylogenetic analysis |
| title | Phylogenetic relationship and characterization of the complete chloroplast genome of Laggera crispata, a folk herbal medicine plant in China |
| title_full | Phylogenetic relationship and characterization of the complete chloroplast genome of Laggera crispata, a folk herbal medicine plant in China |
| title_fullStr | Phylogenetic relationship and characterization of the complete chloroplast genome of Laggera crispata, a folk herbal medicine plant in China |
| title_full_unstemmed | Phylogenetic relationship and characterization of the complete chloroplast genome of Laggera crispata, a folk herbal medicine plant in China |
| title_short | Phylogenetic relationship and characterization of the complete chloroplast genome of Laggera crispata, a folk herbal medicine plant in China |
| title_sort | phylogenetic relationship and characterization of the complete chloroplast genome of laggera crispata a folk herbal medicine plant in china |
| topic | laggera crispata complete chloroplast genome phylogenetic analysis |
| url | http://dx.doi.org/10.1080/23802359.2022.2087553 |
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