Dimorphite-DL: an open-source program for enumerating the ionization states of drug-like small molecules
Abstract Small-molecule protonation can promote or discourage protein binding by altering hydrogen-bond, electrostatic, and van-der-Waals interactions. To improve virtual-screen pose and affinity predictions, researchers must account for all major small-molecule ionization states. But existing progr...
Main Authors: | Patrick J. Ropp, Jesse C. Kaminsky, Sara Yablonski, Jacob D. Durrant |
---|---|
Format: | Article |
Language: | English |
Published: |
BMC
2019-02-01
|
Series: | Journal of Cheminformatics |
Subjects: | |
Online Access: | http://link.springer.com/article/10.1186/s13321-019-0336-9 |
Similar Items
-
Gypsum-DL: an open-source program for preparing small-molecule libraries for structure-based virtual screening
by: Patrick J. Ropp, et al.
Published: (2019-05-01) -
Handbook of proton ionization heats and related thermodynamic quantities/
by: 227382 Christensen, James J., et al.
Published: (1976) -
Laser stripping of hydrogen atoms by direct ionization
by: E Brunetti, et al.
Published: (2015-01-01) -
Predictors of blood ionized calcium concentration in sick adult cattle
by: Tolga Karapinar, et al.
Published: (2024-01-01) -
LigGrep: a tool for filtering docked poses to improve virtual-screening hit rates
by: Emily J. Ha, et al.
Published: (2020-11-01)