Cessation of exclusive breastfeeding and seasonality, but not small intestinal bacterial overgrowth, are associated with environmental enteric dysfunction: A birth cohort study amongst infants in rural Kenya

Summary: Background: Environmental Enteric Dysfunction (EED) is a chronic intestinal inflammatory disorder of unclear aetiology prevalent amongst children in low-income settings and associated with stunting. We aimed to characterise development of EED and its putative risk factors amongst rural Ken...

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Main Authors: Rosie J. Crane, Edward P.K. Parker, Simon Fleming, Agnes Gwela, Wilson Gumbi, Joyce M. Ngoi, Zaydah R. de Laurent, Emily Nyatichi, Moses Ngari, Juliana Wambua, Holm H. Uhlig, James A. Berkley
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Language:English
Published: Elsevier 2022-05-01
Series:EClinicalMedicine
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Online Access:http://www.sciencedirect.com/science/article/pii/S258953702200133X
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author Rosie J. Crane
Edward P.K. Parker
Simon Fleming
Agnes Gwela
Wilson Gumbi
Joyce M. Ngoi
Zaydah R. de Laurent
Emily Nyatichi
Moses Ngari
Juliana Wambua
Holm H. Uhlig
James A. Berkley
author_facet Rosie J. Crane
Edward P.K. Parker
Simon Fleming
Agnes Gwela
Wilson Gumbi
Joyce M. Ngoi
Zaydah R. de Laurent
Emily Nyatichi
Moses Ngari
Juliana Wambua
Holm H. Uhlig
James A. Berkley
author_sort Rosie J. Crane
collection DOAJ
description Summary: Background: Environmental Enteric Dysfunction (EED) is a chronic intestinal inflammatory disorder of unclear aetiology prevalent amongst children in low-income settings and associated with stunting. We aimed to characterise development of EED and its putative risk factors amongst rural Kenyan infants. Methods: In a birth cohort study in Junju, rural coastal Kenya, between August 2015 and January 2017, 100 infants were each followed for nine months. Breastfeeding status was recorded weekly and anthropometry monthly. Acute illnesses and antibiotics were captured by active and passive surveillance. Intestinal function and small intestinal bacterial overgrowth (SIBO) were assessed by monthly urinary lactulose mannitol (LM) and breath hydrogen tests. Faecal alpha-1-antitrypsin, myeloperoxidase and neopterin were measured as EED biomarkers, and microbiota composition assessed by 16S sequencing. Findings: Twenty nine of the 88 participants (33%) that underwent length measurement at nine months of age were stunted (length-for-age Z score <-2). During the rainy season, linear growth was slower and LM ratio was higher. In multivariable models, LM ratio, myeloperoxidase and neopterin increased after cessation of continuous-since-birth exclusive breastfeeding. For LM ratio this only occurred during the rainy season. EED markers were not associated with antibiotics, acute illnesses, SIBO, or gut microbiota diversity. Microbiota diversified with age and was not strongly associated with complementary food introduction or linear growth impairment. Interpretation: Our data suggest that intensified promotion of uninterrupted exclusive breastfeeding amongst infants under six months during the rainy season, where rainfall is seasonal, may help prevent EED. Our findings also suggest that therapeutic strategies directed towards SIBO are unlikely to impact on EED in this setting. However, further development of non-invasive diagnostic methods for SIBO is required. Funding: This research was funded in part by the Wellcome Trust (Research Training Fellowship to RJC (103376/Z/13/Z)). EPKP was supported by the MRC/DfID Newton Fund (MR/N006259/1). JAB was supported by the MRC/DFiD/Wellcome Trust Joint Global Health Trials scheme (MR/M007367/1) and the Bill &amp; Melinda Gates Foundation (OPP1131320). HHU was supported by the NIHR Oxford Biomedical Research Centre (IS-BRC-1215-20008).
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spelling doaj.art-700cfe624c1f44a580123c5922aec60d2022-12-22T02:39:37ZengElsevierEClinicalMedicine2589-53702022-05-0147101403Cessation of exclusive breastfeeding and seasonality, but not small intestinal bacterial overgrowth, are associated with environmental enteric dysfunction: A birth cohort study amongst infants in rural KenyaRosie J. Crane0Edward P.K. Parker1Simon Fleming2Agnes Gwela3Wilson Gumbi4Joyce M. Ngoi5Zaydah R. de Laurent6Emily Nyatichi7Moses Ngari8Juliana Wambua9Holm H. Uhlig10James A. Berkley11Centre for Tropical Medicine and Global Health, Nuffield Department of Medicine, University of Oxford, New Richards Building, Old Road Campus, Roosevelt Drive, Oxford OX3 7LG, UK; KEMRI Wellcome Trust Research Programme, PO Box 80108-230, Kilifi, Kenya; Corresponding author at: Centre for Tropical Medicine and Global Health, Nuffield Department of Medicine, University of Oxford, New Richards Building, Old Road Campus, Roosevelt Drive, Oxford OX3 7LG, UK.Department of Clinical Research, London School of Hygiene and Tropical Medicine, Keppel Street, London WC1E 7HT, UKRoyal Cornwall Hospitals NHS Trust, Treliske, Truro TR1 3LQ, UKKEMRI Wellcome Trust Research Programme, PO Box 80108-230, Kilifi, KenyaKEMRI Wellcome Trust Research Programme, PO Box 80108-230, Kilifi, KenyaKEMRI Wellcome Trust Research Programme, PO Box 80108-230, Kilifi, Kenya; West African Centre for Cell Biology of Infectious Pathogens, University of Ghana, PO Box LG54, Accra, GhanaKEMRI Wellcome Trust Research Programme, PO Box 80108-230, Kilifi, KenyaKEMRI Wellcome Trust Research Programme, PO Box 80108-230, Kilifi, KenyaKEMRI Wellcome Trust Research Programme, PO Box 80108-230, Kilifi, Kenya; The Childhood Acute Illness and Nutrition (CHAIN) Network, P.O Box 43640 – 00100, Nairobi, KenyaKEMRI Wellcome Trust Research Programme, PO Box 80108-230, Kilifi, KenyaTranslational Gastroenterology Unit, University of Oxford, Oxford OX3 9DU, UK; Department of Paediatrics, University of Oxford, Oxford OX3 9DU, UK; NIHR Oxford Biomedical Research Centre, University of Oxford, Oxford OX3 9DU, UKCentre for Tropical Medicine and Global Health, Nuffield Department of Medicine, University of Oxford, New Richards Building, Old Road Campus, Roosevelt Drive, Oxford OX3 7LG, UK; KEMRI Wellcome Trust Research Programme, PO Box 80108-230, Kilifi, Kenya; The Childhood Acute Illness and Nutrition (CHAIN) Network, P.O Box 43640 – 00100, Nairobi, KenyaSummary: Background: Environmental Enteric Dysfunction (EED) is a chronic intestinal inflammatory disorder of unclear aetiology prevalent amongst children in low-income settings and associated with stunting. We aimed to characterise development of EED and its putative risk factors amongst rural Kenyan infants. Methods: In a birth cohort study in Junju, rural coastal Kenya, between August 2015 and January 2017, 100 infants were each followed for nine months. Breastfeeding status was recorded weekly and anthropometry monthly. Acute illnesses and antibiotics were captured by active and passive surveillance. Intestinal function and small intestinal bacterial overgrowth (SIBO) were assessed by monthly urinary lactulose mannitol (LM) and breath hydrogen tests. Faecal alpha-1-antitrypsin, myeloperoxidase and neopterin were measured as EED biomarkers, and microbiota composition assessed by 16S sequencing. Findings: Twenty nine of the 88 participants (33%) that underwent length measurement at nine months of age were stunted (length-for-age Z score <-2). During the rainy season, linear growth was slower and LM ratio was higher. In multivariable models, LM ratio, myeloperoxidase and neopterin increased after cessation of continuous-since-birth exclusive breastfeeding. For LM ratio this only occurred during the rainy season. EED markers were not associated with antibiotics, acute illnesses, SIBO, or gut microbiota diversity. Microbiota diversified with age and was not strongly associated with complementary food introduction or linear growth impairment. Interpretation: Our data suggest that intensified promotion of uninterrupted exclusive breastfeeding amongst infants under six months during the rainy season, where rainfall is seasonal, may help prevent EED. Our findings also suggest that therapeutic strategies directed towards SIBO are unlikely to impact on EED in this setting. However, further development of non-invasive diagnostic methods for SIBO is required. Funding: This research was funded in part by the Wellcome Trust (Research Training Fellowship to RJC (103376/Z/13/Z)). EPKP was supported by the MRC/DfID Newton Fund (MR/N006259/1). JAB was supported by the MRC/DFiD/Wellcome Trust Joint Global Health Trials scheme (MR/M007367/1) and the Bill &amp; Melinda Gates Foundation (OPP1131320). HHU was supported by the NIHR Oxford Biomedical Research Centre (IS-BRC-1215-20008).http://www.sciencedirect.com/science/article/pii/S258953702200133XEnvironmental enteric dysfunctionStuntingSmall intestinal bacterial overgrowthInfant feedingGut microbiotaBreastfeeding
spellingShingle Rosie J. Crane
Edward P.K. Parker
Simon Fleming
Agnes Gwela
Wilson Gumbi
Joyce M. Ngoi
Zaydah R. de Laurent
Emily Nyatichi
Moses Ngari
Juliana Wambua
Holm H. Uhlig
James A. Berkley
Cessation of exclusive breastfeeding and seasonality, but not small intestinal bacterial overgrowth, are associated with environmental enteric dysfunction: A birth cohort study amongst infants in rural Kenya
EClinicalMedicine
Environmental enteric dysfunction
Stunting
Small intestinal bacterial overgrowth
Infant feeding
Gut microbiota
Breastfeeding
title Cessation of exclusive breastfeeding and seasonality, but not small intestinal bacterial overgrowth, are associated with environmental enteric dysfunction: A birth cohort study amongst infants in rural Kenya
title_full Cessation of exclusive breastfeeding and seasonality, but not small intestinal bacterial overgrowth, are associated with environmental enteric dysfunction: A birth cohort study amongst infants in rural Kenya
title_fullStr Cessation of exclusive breastfeeding and seasonality, but not small intestinal bacterial overgrowth, are associated with environmental enteric dysfunction: A birth cohort study amongst infants in rural Kenya
title_full_unstemmed Cessation of exclusive breastfeeding and seasonality, but not small intestinal bacterial overgrowth, are associated with environmental enteric dysfunction: A birth cohort study amongst infants in rural Kenya
title_short Cessation of exclusive breastfeeding and seasonality, but not small intestinal bacterial overgrowth, are associated with environmental enteric dysfunction: A birth cohort study amongst infants in rural Kenya
title_sort cessation of exclusive breastfeeding and seasonality but not small intestinal bacterial overgrowth are associated with environmental enteric dysfunction a birth cohort study amongst infants in rural kenya
topic Environmental enteric dysfunction
Stunting
Small intestinal bacterial overgrowth
Infant feeding
Gut microbiota
Breastfeeding
url http://www.sciencedirect.com/science/article/pii/S258953702200133X
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