Repetitive DNA sequences accelerate molecular cytogenetic research in plants with small chromosomes

Repetitive DNA sequences accelerate molecular cytogenetic research in plants with small chromosomes

Repetitive DNA sequences are highly abundant in plant genomes and are favorable probes for chromosome identification in plants. However, it is difficult to conduct studies on the details of metaphase chromosome structures in plants with small chromosomes due to their highly condensed status. Therefo...

Full description

Bibliographic Details
Main Authors:	Agus Budi Setiawan, Ari Wibowo, Chee How Teo, Shinji Kikuchi, Takato Koba
Format:	Article
Language:	English
Published:	Universitas Gadjah Mada, Yogyakarta 2019-12-01
Series:	Indonesian Journal of Biotechnology
Subjects:	homologous chromosomes microsatellite repeats pachytene chromosomes precise karyotyping repetitive dnas
Online Access:	https://jurnal.ugm.ac.id/ijbiotech/article/view/51726

Similar Items

Tracking the Evolutionary Trends Among Small-Size Fishes of the Genus Pyrrhulina (Characiforme, Lebiasinidae): New Insights From a Molecular Cytogenetic Perspective
by: Renata Luiza Rosa de Moraes, et al.
Published: (2021-10-01)

The Role of Satellite DNAs in Genome Architecture and Sex Chromosome Evolution in Crambidae Moths
by: Diogo C. Cabral-de-Mello, et al.
Published: (2021-03-01)

An improved method for inducing prometaphase chromosomes in plants
by: Agus Budi Setiawan, et al.
Published: (2018-05-01)

Oligo-FISH of <i>Populus simonii</i> Pachytene Chromosomes Improves Karyotyping and Genome Assembly
by: Yilian Zhao, et al.
Published: (2023-06-01)

Molecular cytogenetic analyses reveal extensive chromosomal rearrangements and novel B chromosomes in Moenkhausia (Teleostei, Characidae)
by: Cristiano Neves do Nascimento, et al.
Published: (2020-11-01)

Heterochromatin and microsatellites detection in karyotypes of four sea turtle species: Interspecific chromosomal differences
by: Caroline Regina Dias Machado, et al.
Published: (2020-12-01)

Comparison of the Chromosome Structures between the Chicken and Three Anserid Species, the Domestic Duck (Anas platyrhynchos), Muscovy Duck (Cairina moschata), and Chinese Goose (Anser cygnoides), and the Delineation of their Karyotype Evolution by Comparative Chromosome Mapping
by: Fhamida B. Islam, et al.
Published: (2014-01-01)

The repetitive DNA landscape in Avena (Poaceae): chromosome and genome evolution defined by major repeat classes in whole-genome sequence reads
by: Qing Liu, et al.
Published: (2019-05-01)

Chromosomes of Asian cyprinid fishes: Variable karyotype patterns and evolutionary trends in the genus Osteochilus (Cyprinidae, Labeoninae, “Osteochilini”)
by: Pasakorn Saenjundaeng, et al.
Published: (2020-11-01)

Chromosomal diversification of diploid number, heterochromatin and rDNAs in two species of Phanaeus beetles (Scarabaeidae, Scarabaeinae)
by: Amanda Arcanjo, et al.
Published: (2013-01-01)

Chromosomal Rearrangements and Satellite DNAs: Extensive Chromosome Reshuffling and the Evolution of Neo-Sex Chromosomes in the Genus <i>Pyrrhulina</i> (Teleostei; Characiformes)
by: Renata Luiza Rosa de Moraes, et al.
Published: (2023-09-01)

Expanding the Chromosomal Evolution Understanding of Lygaeioid True Bugs (Lygaeoidea, Pentatomomorpha, Heteroptera) by Classical and Molecular Cytogenetic Analysis
by: Natalia V. Golub, et al.
Published: (2023-03-01)

Chromosome Mapping of Repetitive DNAs in the Picasso Triggerfish (Rhinecanthus aculeatus) in Family Balistidae by Classical and Molecular Cytogenetic Techniques
by: Kamika Sribenja, et al.
Published: (2023-02-01)

Microstructural chromosome reorganization in the genus Trichomycterus (Siluriformes: Trichomycteridae)
by: Maria Lígia M. de Oliveira, et al.

Hidden Compositional Heterogeneity of Fish Chromosomes in the Era of Polished Genome Assemblies
by: Marta Vohnoutová, et al.
Published: (2023-03-01)

Repetitive DNAs and shrink genomes: A chromosomal analysis in nine Columbidae species (Aves, Columbiformes)
by: Rafael Kretschmer, et al.
Published: (2018-02-01)

Editorial: Cytogenomics: Structural Organization and Evolution of Genomes
by: Ricardo Utsunomia, et al.
Published: (2022-06-01)

Cytogenetic Analysis of Amniotic Fluid Cells in 4206 Cases of High-Risk Pregnant Women
by: Huafeng LI, et al.
Published: (2019-01-01)

Comparative cytogenetics in three species of Wood-Warblers (Aves: Passeriformes: Parulidae) reveal divergent banding patterns and chromatic heterogeneity for the W chromosome
by: Alice Lemos Costa, et al.
Published: (2021-05-01)

Cytogenetic Analysis for Suspected Chromosomal Abnormalities; A Five Years Experience
by: Sunil Kumar Polipalli, et al.
Published: (2016-09-01)

Heteromorphic ZZ/ZW sex chromosomes sharing gene content with mammalian XX/XY are conserved in Madagascan chameleons of the genus Furcifer
by: Michail Rovatsos, et al.
Published: (2024-02-01)

Endometrial Carcinoma: Molecular Cytogenetics and Transcriptomic Profile
by: Marta Brunetti, et al.
Published: (2022-07-01)

Chromosomal Diversification in Ancistrus Species (Siluriformes: Loricariidae) Inferred From Repetitive Sequence Analysis
by: Kevin Santos da Silva, et al.
Published: (2022-03-01)

Quality Evaluation for Edge Detection of Chromosome G-band Images for Segmentation
by: Natthariya LAOPRACHA, et al.
Published: (2013-02-01)

First cytogenetic study of the Somphong’s rasbora (Trigonostigma somphongsi) (Perciformes, Cyprinidae), a critically endangered species in Thailand
by: Surachest Aiumsumang, et al.
Published: (2024-03-01)

Consequence of Paradigm Shift with Repeat Landscapes in Reptiles: Powerful Facilitators of Chromosomal Rearrangements for Diversity and Evolution
by: Syed Farhan Ahmad, et al.
Published: (2020-07-01)

A De Novo Deletion of Chromosome 18p with Persistent Limb Tremor and Difficulty Speaking
by: Aghil Esmaeili-Bandboni, et al.
Published: (2019-03-01)

Cytogenetic Evidence for Sex Chromosomes and Karyotype Evolution in Anguimorphan Lizards
by: Barbora Augstenová, et al.
Published: (2021-06-01)

The satellite DNA AflaSAT-1 in the A and B chromosomes of the grasshopper Abracris flavolineata
by: Diogo Milani, et al.
Published: (2017-08-01)

Identification of Chromosomes and Chromosome Rearrangements in Crop Brassicas and Raphanus sativus: A Cytogenetic Toolkit Using Synthesized Massive Oligonucleotide Libraries
by: Neha Agrawal, et al.
Published: (2020-12-01)

Chromosomal Studies in Individuals with Infertility
by: Maria Elena de la Torre Santos, et al.
Published: (2020-01-01)

Molecular Composition of Heterochromatin and Its Contribution to Chromosome Variation in the <i>Microtus thomasi</i>/<i>Microtus atticus</i> Species Complex
by: Michail Rovatsos, et al.
Published: (2021-05-01)

Identification of Iguania Ancestral Syntenic Blocks and Putative Sex Chromosomes in the Veiled Chameleon (<i>Chamaeleo calyptratus</i>, Chamaeleonidae, Iguania)
by: Katerina V. Tishakova, et al.
Published: (2022-12-01)

Characterization of Chromosomal Abnormalities in Cancer by Spectral Karyotyping
by: Sharafudeen Dahiru Abubakar
Published: (2019-11-01)

IDENTIFICATION OF BAWANG SABRANG (Eleutherine americana Merr. ex K. Heyne) IN INDONESIA BASED ON CHROMOSOME CHARACTERS
by: Budi Setiadi Daryono, et al.
Published: (2013-01-01)

Molecular and cytogenetic analyses of cryptic species within the Synbranchus marmoratus Bloch, 1795 (Synbranchiformes: Synbranchidae) grouping: species delimitations, karyotypic evolution and intraspecific diversification
by: Ricardo Utsunomia, et al.

Repetitive Elements in Humans
by: Thomas Liehr
Published: (2021-02-01)

Study on Types of Chromosomal Abnormalities among Children and Adolescents in Hamadan
by: Fatemeh Bahreini, et al.
Published: (2021-12-01)

Identification of Local Melon (Cucumis melo L. var. Bartek) Based on Chromosomal Characters
by: BUDI SETIADI DARYONO, et al.
Published: (2011-12-01)

Identification of Local Melon (Cucumis melo L. var. Bartek) Based on Chromosomal Characters
by: BUDI SETIADI DARYONO, et al.
Published: (2011-12-01)