Complete mitochondrial genome of Phyllonorycter ringoniella (Lepidoptera: Gracillariidae)
The complete mitochondrial genome of Phyllonorycter ringoniella (Matsumura, 1931) is characterized by a circular with 15,729 bp in size, containing 37 encoded genes and a control region. The gene order and nucleotide composition are similar to the known gracillariid mitogenomes. All protein-coding g...
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| Format: | Article |
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Taylor & Francis Group
2022-05-01
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| Series: | Mitochondrial DNA. Part B. Resources |
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| Online Access: | http://dx.doi.org/10.1080/23802359.2022.2072245 |
| _version_ | 1827772241668997120 |
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| author | Nan Zhou Guoliang Xu Zhanbao Song Shengping Zhang Chun Meng Dezhi Lv Sumiao Yang |
| author_facet | Nan Zhou Guoliang Xu Zhanbao Song Shengping Zhang Chun Meng Dezhi Lv Sumiao Yang |
| author_sort | Nan Zhou |
| collection | DOAJ |
| description | The complete mitochondrial genome of Phyllonorycter ringoniella (Matsumura, 1931) is characterized by a circular with 15,729 bp in size, containing 37 encoded genes and a control region. The gene order and nucleotide composition are similar to the known gracillariid mitogenomes. All protein-coding genes (PCGs) initiate with ATN and terminate with TAN, while cox1 starts with CGA, cox1, cox2, nad3, and nad5 terminate with an incomplete codon TA– or T–. All transfer RNA genes (tRNAs) can fold into typical clover-leaf structure, except for trnS1 (AGN), in which dihydrouridine stem is simplified to form a loop structure. The control region is located between 12S rRNA and trnM with relatively strong AT bias. The phylogenetic trees reveal that two subfamilies Oecophyllembiinae and Acrocercopinae were clustered together, and that clade was sister to the subfamily Lithocolletinae. All species of the genus Phyllonorycter grouped into a monophyletic clade and the P. ringoniella was closely related to P. platani. |
| first_indexed | 2024-03-11T13:05:33Z |
| format | Article |
| id | doaj.art-707d9b2ab54a496aaf652c0841c49b8f |
| institution | Directory Open Access Journal |
| issn | 2380-2359 |
| language | English |
| last_indexed | 2024-03-11T13:05:33Z |
| publishDate | 2022-05-01 |
| publisher | Taylor & Francis Group |
| record_format | Article |
| series | Mitochondrial DNA. Part B. Resources |
| spelling | doaj.art-707d9b2ab54a496aaf652c0841c49b8f2023-11-03T14:36:03ZengTaylor & Francis GroupMitochondrial DNA. Part B. Resources2380-23592022-05-017579880010.1080/23802359.2022.20722452072245Complete mitochondrial genome of Phyllonorycter ringoniella (Lepidoptera: Gracillariidae)Nan Zhou0Guoliang Xu1Zhanbao Song2Shengping Zhang3Chun Meng4Dezhi Lv5Sumiao Yang6Shijiazhuang Institute of Pomology, Hebei Academy of Agriculture and Forestry SciencesShijiazhuang Institute of Pomology, Hebei Academy of Agriculture and Forestry SciencesPingquan Agricultural and Rural BureauShijiazhuang Institute of Pomology, Hebei Academy of Agriculture and Forestry SciencesShenzhou Liangsang Breeding FarmShijiazhuang Institute of Pomology, Hebei Academy of Agriculture and Forestry SciencesShijiazhuang Institute of Pomology, Hebei Academy of Agriculture and Forestry SciencesThe complete mitochondrial genome of Phyllonorycter ringoniella (Matsumura, 1931) is characterized by a circular with 15,729 bp in size, containing 37 encoded genes and a control region. The gene order and nucleotide composition are similar to the known gracillariid mitogenomes. All protein-coding genes (PCGs) initiate with ATN and terminate with TAN, while cox1 starts with CGA, cox1, cox2, nad3, and nad5 terminate with an incomplete codon TA– or T–. All transfer RNA genes (tRNAs) can fold into typical clover-leaf structure, except for trnS1 (AGN), in which dihydrouridine stem is simplified to form a loop structure. The control region is located between 12S rRNA and trnM with relatively strong AT bias. The phylogenetic trees reveal that two subfamilies Oecophyllembiinae and Acrocercopinae were clustered together, and that clade was sister to the subfamily Lithocolletinae. All species of the genus Phyllonorycter grouped into a monophyletic clade and the P. ringoniella was closely related to P. platani.http://dx.doi.org/10.1080/23802359.2022.2072245mitochondrial genomegracillariidaephyllonorycter ringoniellaphylogenetic analysis |
| spellingShingle | Nan Zhou Guoliang Xu Zhanbao Song Shengping Zhang Chun Meng Dezhi Lv Sumiao Yang Complete mitochondrial genome of Phyllonorycter ringoniella (Lepidoptera: Gracillariidae) Mitochondrial DNA. Part B. Resources mitochondrial genome gracillariidae phyllonorycter ringoniella phylogenetic analysis |
| title | Complete mitochondrial genome of Phyllonorycter ringoniella (Lepidoptera: Gracillariidae) |
| title_full | Complete mitochondrial genome of Phyllonorycter ringoniella (Lepidoptera: Gracillariidae) |
| title_fullStr | Complete mitochondrial genome of Phyllonorycter ringoniella (Lepidoptera: Gracillariidae) |
| title_full_unstemmed | Complete mitochondrial genome of Phyllonorycter ringoniella (Lepidoptera: Gracillariidae) |
| title_short | Complete mitochondrial genome of Phyllonorycter ringoniella (Lepidoptera: Gracillariidae) |
| title_sort | complete mitochondrial genome of phyllonorycter ringoniella lepidoptera gracillariidae |
| topic | mitochondrial genome gracillariidae phyllonorycter ringoniella phylogenetic analysis |
| url | http://dx.doi.org/10.1080/23802359.2022.2072245 |
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