MED1, a novel binding partner of BRCA1, regulates homologous recombination and R-loop processing

Abstract Homologous recombination (HR) is a major repair pathway of DNA double-strand breaks and is closely related to carcinogenesis. HR deficiency has been established as a therapeutic target. The aim of this study was to elucidate the functions of a novel HR factor, Mediator complex subunit 1 (ME...

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Main Authors: Harunori Honjoh, Michihiro Tanikawa, Osamu Wada-Hiraike, Katsutoshi Oda, Hirofumi Inaba, Asako Kukita, Yoshiko Kawata, Misako Kusakabe, Saki Tsuchimochi, Ayumi Taguchi, Yuichiro Miyamoto, Kenbun Sone, Tetsushi Tsuruga, Mayuyo Mori-Uchino, Yoko Matsumoto, Yutaka Osuga
Format: Article
Language:English
Published: Nature Portfolio 2022-10-01
Series:Scientific Reports
Online Access:https://doi.org/10.1038/s41598-022-21495-8
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author Harunori Honjoh
Michihiro Tanikawa
Osamu Wada-Hiraike
Katsutoshi Oda
Hirofumi Inaba
Asako Kukita
Yoshiko Kawata
Misako Kusakabe
Saki Tsuchimochi
Ayumi Taguchi
Yuichiro Miyamoto
Kenbun Sone
Tetsushi Tsuruga
Mayuyo Mori-Uchino
Yoko Matsumoto
Yutaka Osuga
author_facet Harunori Honjoh
Michihiro Tanikawa
Osamu Wada-Hiraike
Katsutoshi Oda
Hirofumi Inaba
Asako Kukita
Yoshiko Kawata
Misako Kusakabe
Saki Tsuchimochi
Ayumi Taguchi
Yuichiro Miyamoto
Kenbun Sone
Tetsushi Tsuruga
Mayuyo Mori-Uchino
Yoko Matsumoto
Yutaka Osuga
author_sort Harunori Honjoh
collection DOAJ
description Abstract Homologous recombination (HR) is a major repair pathway of DNA double-strand breaks and is closely related to carcinogenesis. HR deficiency has been established as a therapeutic target. The aim of this study was to elucidate the functions of a novel HR factor, Mediator complex subunit 1 (MED1), and its association with BRCA1. Formation of the MED1/BRCA1 complex was examined by immunoprecipitation and GST-pull down assays. The transcription cofactor role of BRCA1 was evaluated using luciferase assays. The roles of MED1 on DNA damage response and HR were analyzed by immunofluorescence and HR assays. R-loop accumulation was analyzed using immunofluorescence. R-loop-induced DNA damage was analyzed by comet assays. Immunoprecipitation and GST-pull down assays demonstrated that MED1 is a novel binding partner of BRCA1 and binds to the BRCT domain. Luciferase assays showed that MED1 potentiated the transcription ability of BRCT by two-fold. In MED1-depleted cells, recruitment of HR genes, such as RPA and γH2AX, to DNA damage sites was severely impaired. HR assays showed that MED1 knockdown significantly decreased HR activity. R-loop nuclear accumulation and R-loop-induced comet tails were observed in MED1-depleted cells. We conclude that the transcription factor MED1 contributes to the regulation of the HR pathway and R-loop processing.
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spelling doaj.art-70d1c957390a4af6ab20a679cbdd5d2b2022-12-22T04:06:59ZengNature PortfolioScientific Reports2045-23222022-10-0112111210.1038/s41598-022-21495-8MED1, a novel binding partner of BRCA1, regulates homologous recombination and R-loop processingHarunori Honjoh0Michihiro Tanikawa1Osamu Wada-Hiraike2Katsutoshi Oda3Hirofumi Inaba4Asako Kukita5Yoshiko Kawata6Misako Kusakabe7Saki Tsuchimochi8Ayumi Taguchi9Yuichiro Miyamoto10Kenbun Sone11Tetsushi Tsuruga12Mayuyo Mori-Uchino13Yoko Matsumoto14Yutaka Osuga15Department of Obstetrics and Gynecology, Graduate School of Medicine, The University of TokyoDepartment of Obstetrics and Gynecology, Graduate School of Medicine, The University of TokyoDepartment of Obstetrics and Gynecology, Graduate School of Medicine, The University of TokyoDivision of Integrative Genomics, Graduate School of Medicine, The University of TokyoDepartment of Obstetrics and Gynecology, Graduate School of Medicine, The University of TokyoDepartment of Obstetrics and Gynecology, Graduate School of Medicine, The University of TokyoDepartment of Obstetrics and Gynecology, Graduate School of Medicine, The University of TokyoDepartment of Obstetrics and Gynecology, Graduate School of Medicine, The University of TokyoDepartment of Obstetrics and Gynecology, Graduate School of Medicine, The University of TokyoDepartment of Obstetrics and Gynecology, Graduate School of Medicine, The University of TokyoDepartment of Obstetrics and Gynecology, Graduate School of Medicine, The University of TokyoDepartment of Obstetrics and Gynecology, Graduate School of Medicine, The University of TokyoDepartment of Obstetrics and Gynecology, Graduate School of Medicine, The University of TokyoDepartment of Obstetrics and Gynecology, Graduate School of Medicine, The University of TokyoDepartment of Obstetrics and Gynecology, Graduate School of Medicine, The University of TokyoDepartment of Obstetrics and Gynecology, Graduate School of Medicine, The University of TokyoAbstract Homologous recombination (HR) is a major repair pathway of DNA double-strand breaks and is closely related to carcinogenesis. HR deficiency has been established as a therapeutic target. The aim of this study was to elucidate the functions of a novel HR factor, Mediator complex subunit 1 (MED1), and its association with BRCA1. Formation of the MED1/BRCA1 complex was examined by immunoprecipitation and GST-pull down assays. The transcription cofactor role of BRCA1 was evaluated using luciferase assays. The roles of MED1 on DNA damage response and HR were analyzed by immunofluorescence and HR assays. R-loop accumulation was analyzed using immunofluorescence. R-loop-induced DNA damage was analyzed by comet assays. Immunoprecipitation and GST-pull down assays demonstrated that MED1 is a novel binding partner of BRCA1 and binds to the BRCT domain. Luciferase assays showed that MED1 potentiated the transcription ability of BRCT by two-fold. In MED1-depleted cells, recruitment of HR genes, such as RPA and γH2AX, to DNA damage sites was severely impaired. HR assays showed that MED1 knockdown significantly decreased HR activity. R-loop nuclear accumulation and R-loop-induced comet tails were observed in MED1-depleted cells. We conclude that the transcription factor MED1 contributes to the regulation of the HR pathway and R-loop processing.https://doi.org/10.1038/s41598-022-21495-8
spellingShingle Harunori Honjoh
Michihiro Tanikawa
Osamu Wada-Hiraike
Katsutoshi Oda
Hirofumi Inaba
Asako Kukita
Yoshiko Kawata
Misako Kusakabe
Saki Tsuchimochi
Ayumi Taguchi
Yuichiro Miyamoto
Kenbun Sone
Tetsushi Tsuruga
Mayuyo Mori-Uchino
Yoko Matsumoto
Yutaka Osuga
MED1, a novel binding partner of BRCA1, regulates homologous recombination and R-loop processing
Scientific Reports
title MED1, a novel binding partner of BRCA1, regulates homologous recombination and R-loop processing
title_full MED1, a novel binding partner of BRCA1, regulates homologous recombination and R-loop processing
title_fullStr MED1, a novel binding partner of BRCA1, regulates homologous recombination and R-loop processing
title_full_unstemmed MED1, a novel binding partner of BRCA1, regulates homologous recombination and R-loop processing
title_short MED1, a novel binding partner of BRCA1, regulates homologous recombination and R-loop processing
title_sort med1 a novel binding partner of brca1 regulates homologous recombination and r loop processing
url https://doi.org/10.1038/s41598-022-21495-8
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