Clearing-induced tisssue shrinkage: A novel observation of a thickness size effect.

The use of clearing agents has provided new insights in various fields of medical research (developmental biology, neurology) by enabling examination of tissue architecture in 3D. One of the challenges is that clearing agents induce tissue shrinkage and the shrinkage rates reported in the literature...

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Main Authors: R C M Vulders, R C van Hoogenhuizen, E van der Giessen, P J van der Zaag
Format: Article
Language:English
Published: Public Library of Science (PLoS) 2021-01-01
Series:PLoS ONE
Online Access:https://doi.org/10.1371/journal.pone.0261417
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author R C M Vulders
R C van Hoogenhuizen
E van der Giessen
P J van der Zaag
author_facet R C M Vulders
R C van Hoogenhuizen
E van der Giessen
P J van der Zaag
author_sort R C M Vulders
collection DOAJ
description The use of clearing agents has provided new insights in various fields of medical research (developmental biology, neurology) by enabling examination of tissue architecture in 3D. One of the challenges is that clearing agents induce tissue shrinkage and the shrinkage rates reported in the literature are incoherent. Here, we report that for a classical clearing agent, benzyl-alcohol benzyl-benzoate (BABB), the shrinkage decreases significantly with increasing sample size, and present an analytical formula describing this.
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spelling doaj.art-71b969c40c1b488f889299480918883e2022-12-21T21:20:16ZengPublic Library of Science (PLoS)PLoS ONE1932-62032021-01-011612e026141710.1371/journal.pone.0261417Clearing-induced tisssue shrinkage: A novel observation of a thickness size effect.R C M VuldersR C van HoogenhuizenE van der GiessenP J van der ZaagThe use of clearing agents has provided new insights in various fields of medical research (developmental biology, neurology) by enabling examination of tissue architecture in 3D. One of the challenges is that clearing agents induce tissue shrinkage and the shrinkage rates reported in the literature are incoherent. Here, we report that for a classical clearing agent, benzyl-alcohol benzyl-benzoate (BABB), the shrinkage decreases significantly with increasing sample size, and present an analytical formula describing this.https://doi.org/10.1371/journal.pone.0261417
spellingShingle R C M Vulders
R C van Hoogenhuizen
E van der Giessen
P J van der Zaag
Clearing-induced tisssue shrinkage: A novel observation of a thickness size effect.
PLoS ONE
title Clearing-induced tisssue shrinkage: A novel observation of a thickness size effect.
title_full Clearing-induced tisssue shrinkage: A novel observation of a thickness size effect.
title_fullStr Clearing-induced tisssue shrinkage: A novel observation of a thickness size effect.
title_full_unstemmed Clearing-induced tisssue shrinkage: A novel observation of a thickness size effect.
title_short Clearing-induced tisssue shrinkage: A novel observation of a thickness size effect.
title_sort clearing induced tisssue shrinkage a novel observation of a thickness size effect
url https://doi.org/10.1371/journal.pone.0261417
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AT rcvanhoogenhuizen clearinginducedtisssueshrinkageanovelobservationofathicknesssizeeffect
AT evandergiessen clearinginducedtisssueshrinkageanovelobservationofathicknesssizeeffect
AT pjvanderzaag clearinginducedtisssueshrinkageanovelobservationofathicknesssizeeffect