Genome-Wide Characterization and Abiotic Stresses Expression Analysis of Annexin Family Genes in Poplar
Poplar is an illustrious industrial woody plant with rapid growth, providing a range of materials, and having simple post-treatment. Various kinds of environmental stresses limit its output. Plant annexin (ANN) is a calcium-dependent phospholipid-binding protein involved in plant metabolism, growth...
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MDPI AG
2022-01-01
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| Series: | International Journal of Molecular Sciences |
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| Online Access: | https://www.mdpi.com/1422-0067/23/1/515 |
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| author | Hui Wei Ali Movahedi Guoyuan Liu Yixin Li Shiwei Liu Chunmei Yu Yanhong Chen Fei Zhong Jian Zhang |
| author_facet | Hui Wei Ali Movahedi Guoyuan Liu Yixin Li Shiwei Liu Chunmei Yu Yanhong Chen Fei Zhong Jian Zhang |
| author_sort | Hui Wei |
| collection | DOAJ |
| description | Poplar is an illustrious industrial woody plant with rapid growth, providing a range of materials, and having simple post-treatment. Various kinds of environmental stresses limit its output. Plant annexin (ANN) is a calcium-dependent phospholipid-binding protein involved in plant metabolism, growth and development, and cooperatively regulating drought resistance, salt tolerance, and various stress responses. However, the features of the PtANN gene family and different stress responses remain unknown in poplar. This study identified 12 <i>PtANN</i> genes in the <i>P. trichocarpa</i> whole-genome and PtANNs divided into three subfamilies based on the phylogenetic tree. The PtANNs clustered into the same clade shared similar gene structures and conserved motifs. The 12 <i>PtANN</i> genes were located in ten chromosomes, and segmental duplication events were illustrated as the main duplication method. Additionally, the PtANN4 homogenous with AtANN1 was detected localized in the cytoplasm and plasma membrane. In addition, expression levels of <i>PtANNs</i> were induced by multiple abiotic stresses, which indicated that PtANNs could widely participate in response to abiotic stress. These results revealed the molecular evolution of <i>PtANNs</i> and their profiles in response to abiotic stress. |
| first_indexed | 2024-03-10T03:37:39Z |
| format | Article |
| id | doaj.art-7273500a9eac4be6bdfcee3a3e92e869 |
| institution | Directory Open Access Journal |
| issn | 1661-6596 1422-0067 |
| language | English |
| last_indexed | 2024-03-10T03:37:39Z |
| publishDate | 2022-01-01 |
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| series | International Journal of Molecular Sciences |
| spelling | doaj.art-7273500a9eac4be6bdfcee3a3e92e8692023-11-23T11:41:12ZengMDPI AGInternational Journal of Molecular Sciences1661-65961422-00672022-01-0123151510.3390/ijms23010515Genome-Wide Characterization and Abiotic Stresses Expression Analysis of Annexin Family Genes in PoplarHui Wei0Ali Movahedi1Guoyuan Liu2Yixin Li3Shiwei Liu4Chunmei Yu5Yanhong Chen6Fei Zhong7Jian Zhang8Key Laboratory of Landscape Plant Genetics and Breeding, School of Life Sciences, Nantong University, Nantong 226000, ChinaCo-Innovation Center for Sustainable Forestry in Southern China, Key Laboratory of Forest Genetics & Biotechnology, Ministry of Education, College of Biology and the Environment, Nanjing Forestry University, Nanjing 210037, ChinaKey Laboratory of Landscape Plant Genetics and Breeding, School of Life Sciences, Nantong University, Nantong 226000, ChinaKey Laboratory of Landscape Plant Genetics and Breeding, School of Life Sciences, Nantong University, Nantong 226000, ChinaKey Laboratory of Landscape Plant Genetics and Breeding, School of Life Sciences, Nantong University, Nantong 226000, ChinaKey Laboratory of Landscape Plant Genetics and Breeding, School of Life Sciences, Nantong University, Nantong 226000, ChinaKey Laboratory of Landscape Plant Genetics and Breeding, School of Life Sciences, Nantong University, Nantong 226000, ChinaKey Laboratory of Landscape Plant Genetics and Breeding, School of Life Sciences, Nantong University, Nantong 226000, ChinaKey Laboratory of Landscape Plant Genetics and Breeding, School of Life Sciences, Nantong University, Nantong 226000, ChinaPoplar is an illustrious industrial woody plant with rapid growth, providing a range of materials, and having simple post-treatment. Various kinds of environmental stresses limit its output. Plant annexin (ANN) is a calcium-dependent phospholipid-binding protein involved in plant metabolism, growth and development, and cooperatively regulating drought resistance, salt tolerance, and various stress responses. However, the features of the PtANN gene family and different stress responses remain unknown in poplar. This study identified 12 <i>PtANN</i> genes in the <i>P. trichocarpa</i> whole-genome and PtANNs divided into three subfamilies based on the phylogenetic tree. The PtANNs clustered into the same clade shared similar gene structures and conserved motifs. The 12 <i>PtANN</i> genes were located in ten chromosomes, and segmental duplication events were illustrated as the main duplication method. Additionally, the PtANN4 homogenous with AtANN1 was detected localized in the cytoplasm and plasma membrane. In addition, expression levels of <i>PtANNs</i> were induced by multiple abiotic stresses, which indicated that PtANNs could widely participate in response to abiotic stress. These results revealed the molecular evolution of <i>PtANNs</i> and their profiles in response to abiotic stress.https://www.mdpi.com/1422-0067/23/1/515poplar annexinduplicationtissue-specific expressionabiotic stress |
| spellingShingle | Hui Wei Ali Movahedi Guoyuan Liu Yixin Li Shiwei Liu Chunmei Yu Yanhong Chen Fei Zhong Jian Zhang Genome-Wide Characterization and Abiotic Stresses Expression Analysis of Annexin Family Genes in Poplar International Journal of Molecular Sciences poplar annexin duplication tissue-specific expression abiotic stress |
| title | Genome-Wide Characterization and Abiotic Stresses Expression Analysis of Annexin Family Genes in Poplar |
| title_full | Genome-Wide Characterization and Abiotic Stresses Expression Analysis of Annexin Family Genes in Poplar |
| title_fullStr | Genome-Wide Characterization and Abiotic Stresses Expression Analysis of Annexin Family Genes in Poplar |
| title_full_unstemmed | Genome-Wide Characterization and Abiotic Stresses Expression Analysis of Annexin Family Genes in Poplar |
| title_short | Genome-Wide Characterization and Abiotic Stresses Expression Analysis of Annexin Family Genes in Poplar |
| title_sort | genome wide characterization and abiotic stresses expression analysis of annexin family genes in poplar |
| topic | poplar annexin duplication tissue-specific expression abiotic stress |
| url | https://www.mdpi.com/1422-0067/23/1/515 |
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