The complete mitogenome of Acropora nana (Cnidarian: Acroporidae)
Acropora nana belongs to Cnidaria phylum, Anthozoa class, and staghorn coral groups. Like other corals, Acropora could be an indicator for environmental changes and with great conservational values. In this study, the complete mitogenome sequence of A. nana (Cnidarian: Acroporidae), has been decoded...
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| Format: | Article |
| Language: | English |
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Taylor & Francis Group
2017-12-01
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| Series: | Mitochondrial DNA. Part B. Resources |
| Subjects: | |
| Online Access: | http://dx.doi.org/10.1080/23802359.2017.1365638 |
| _version_ | 1827774365376184320 |
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| author | Xinming Liu Xinqing Zheng Chung-Der Hsiao Rongcheng Lin Xiaofeng Shi Wentao Niu |
| author_facet | Xinming Liu Xinqing Zheng Chung-Der Hsiao Rongcheng Lin Xiaofeng Shi Wentao Niu |
| author_sort | Xinming Liu |
| collection | DOAJ |
| description | Acropora nana belongs to Cnidaria phylum, Anthozoa class, and staghorn coral groups. Like other corals, Acropora could be an indicator for environmental changes and with great conservational values. In this study, the complete mitogenome sequence of A. nana (Cnidarian: Acroporidae), has been decoded for the first time by low coverage whole genome sequencing method. The overall base composition of A. nana mitogenome is 25.0% for A, 13.8% for C, 24.4% for G, and 36.9% for T, and has low GC content of 38.2%. The assembled mitogenome, consisting of 18,480 bp, has unique 13 protein-coding genes (PCGs), three transfer RNAs, and two ribosomal RNAs genes. The A. nana has one big intron insert in ND5 gene. The complete mitogenome of A. nana provides essential and important DNA molecular data for further phylogenetic and evolutionary analysis for stony corals. |
| first_indexed | 2024-03-11T13:36:25Z |
| format | Article |
| id | doaj.art-72e891769e344762900e4764119f9bd2 |
| institution | Directory Open Access Journal |
| issn | 2380-2359 |
| language | English |
| last_indexed | 2024-03-11T13:36:25Z |
| publishDate | 2017-12-01 |
| publisher | Taylor & Francis Group |
| record_format | Article |
| series | Mitochondrial DNA. Part B. Resources |
| spelling | doaj.art-72e891769e344762900e4764119f9bd22023-11-02T15:42:57ZengTaylor & Francis GroupMitochondrial DNA. Part B. Resources2380-23592017-12-012254454510.1080/23802359.2017.13656381365638The complete mitogenome of Acropora nana (Cnidarian: Acroporidae)Xinming Liu0Xinqing Zheng1Chung-Der Hsiao2Rongcheng Lin3Xiaofeng Shi4Wentao Niu5Guangxi Academy of OceanographyThird Institute of Oceanography, State Oceanic AdministrationChung Yuan Christian UniversityThird Institute of Oceanography, State Oceanic AdministrationThird Institute of Oceanography, State Oceanic AdministrationThird Institute of Oceanography, State Oceanic AdministrationAcropora nana belongs to Cnidaria phylum, Anthozoa class, and staghorn coral groups. Like other corals, Acropora could be an indicator for environmental changes and with great conservational values. In this study, the complete mitogenome sequence of A. nana (Cnidarian: Acroporidae), has been decoded for the first time by low coverage whole genome sequencing method. The overall base composition of A. nana mitogenome is 25.0% for A, 13.8% for C, 24.4% for G, and 36.9% for T, and has low GC content of 38.2%. The assembled mitogenome, consisting of 18,480 bp, has unique 13 protein-coding genes (PCGs), three transfer RNAs, and two ribosomal RNAs genes. The A. nana has one big intron insert in ND5 gene. The complete mitogenome of A. nana provides essential and important DNA molecular data for further phylogenetic and evolutionary analysis for stony corals.http://dx.doi.org/10.1080/23802359.2017.1365638acropora nanamitogenomenext generation sequencing |
| spellingShingle | Xinming Liu Xinqing Zheng Chung-Der Hsiao Rongcheng Lin Xiaofeng Shi Wentao Niu The complete mitogenome of Acropora nana (Cnidarian: Acroporidae) Mitochondrial DNA. Part B. Resources acropora nana mitogenome next generation sequencing |
| title | The complete mitogenome of Acropora nana (Cnidarian: Acroporidae) |
| title_full | The complete mitogenome of Acropora nana (Cnidarian: Acroporidae) |
| title_fullStr | The complete mitogenome of Acropora nana (Cnidarian: Acroporidae) |
| title_full_unstemmed | The complete mitogenome of Acropora nana (Cnidarian: Acroporidae) |
| title_short | The complete mitogenome of Acropora nana (Cnidarian: Acroporidae) |
| title_sort | complete mitogenome of acropora nana cnidarian acroporidae |
| topic | acropora nana mitogenome next generation sequencing |
| url | http://dx.doi.org/10.1080/23802359.2017.1365638 |
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